CONVERGENCE ANALYSIS OF STRUCTURE-PRESERVING NUMERICAL METHODS BASED ON SLOTBOOM TRANSFORMATION FOR THE POISSON-NERNST-PLANCK EQUATIONS

被引:1
作者
Ding, Jie [1 ]
Wang, Cheng [2 ]
Zhou, Shenggao [3 ,4 ]
机构
[1] Jiangnan Univ, Sch Sci, Wuxi 214122, Jiangsu, Peoples R China
[2] Univ Massachusetts, Dept Math, N Dartmouth, MA 02747 USA
[3] Shanghai Jiao Tong Univ, Sch Math Sci, MOE LSC, Shanghai 200240, Peoples R China
[4] Shanghai Jiao Tong Univ, CMA Shanghai, Shanghai 200240, Peoples R China
基金
中国国家自然科学基金;
关键词
Poisson-Nernst-Planck equations; Slotboom reformulation; mobility average; convergence analysis and error estimate; higher order consistency estimate; FINITE-DIFFERENCE SCHEME; ELEMENT METHODS;
D O I
暂无
中图分类号
O29 [应用数学];
学科分类号
070104 ;
摘要
The analysis of structure-preserving numerical methods for the Poisson-Nernst-Planck (PNP) system has attracted growing interests in recent years. A class of numerical algorithms have been developed based on the Slotboom reformulation, and the mass conservation, ionic concentration positivity, free-energy dissipation have been proved at a discrete level. Nonetheless, a rigorous convergence analysis for these Slotboom reformulation-based, structure-preserving schemes has been an open problem for a long time. In this work, we provide an optimal rate convergence analysis and error estimate for finite difference schemes based on the Slotboom reformulation. Different options of mobility average at the staggered mesh points are considered in the finite-difference spatial discretization, such as the harmonic mean, geometric mean, arithmetic mean, and entropic mean. A semi-implicit temporal discretization is applied, which in turn results in a non-constant coefficient, positive-definite linear system at each time step. A higher order asymptotic expansion is applied in the consistency analysis, and such a higher order consistency estimate is necessary to control the discrete maximum norm of the concentration variables. In convergence estimate, the harmonic mean for the mobility average, which turns out to bring lots of convenience in the theoretical analysis, is taken for simplicity, while other options of mobility average would also lead to the desired error estimate, with more technical details involved. As a result, an optimal rate convergence analysis on concentrations, electric potential, and ionic fluxes is derived, which is the first such result for the structure-preserving numerical schemes based on the Slotboom reformulation. It is remarked that the convergence analysis leads to a theoretical justification of the conditional energy dissipation analysis, which relies on the maximum norm bounds of the concentration and the gradient of the electric potential. Some numerical results are also presented to demonstrate the accuracy and structure-preserving performance of the associated schemes.
引用
收藏
页码:459 / 484
页数:26
相关论文
共 54 条
  • [1] GENERALIZED FINITE-ELEMENT METHODS - THEIR PERFORMANCE AND THEIR RELATION TO MIXED METHODS
    BABUSKA, I
    OSBORN, JE
    [J]. SIAM JOURNAL ON NUMERICAL ANALYSIS, 1983, 20 (03) : 510 - 536
  • [2] CONVERGENCE ANALYSIS OF A SECOND ORDER CONVEX SPLITTING SCHEME FOR THE MODIFIED PHASE FIELD CRYSTAL EQUATION
    Baskaran, A.
    Lowengrub, J. S.
    Wang, C.
    Wise, S. M.
    [J]. SIAM JOURNAL ON NUMERICAL ANALYSIS, 2013, 51 (05) : 2851 - 2873
  • [3] Diffuse-charge dynamics in electrochemical systems
    Bazant, Martin Z.
    Thornton, Katsuyo
    Ajdari, Armand
    [J]. Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 2004, 70 (2 1): : 021506 - 1
  • [4] Brezzi F., 2012, MIXED HYBRID FINITE, P1
  • [5] Chatard M., 2014, SIAM J NUMER ANAL, V52, P1
  • [6] A Stabilized Finite Element Method for Modified Poisson-Nernst-Planck Equations to Determine Ion Flow Through a Nanopore
    Chaudhry, Jehanzeb Hameed
    Comer, Jeffrey
    Aksimentiev, Aleksei
    Olson, Luke N.
    [J]. COMMUNICATIONS IN COMPUTATIONAL PHYSICS, 2014, 15 (01) : 93 - 125
  • [7] Deep generative model embedding of single-cell RNA-Seq profiles on hyperspheres and hyperbolic spaces
    Ding, Jiarui
    Regev, Aviv
    [J]. NATURE COMMUNICATIONS, 2021, 12 (01)
  • [8] Structure-preserving and efficient numerical methods for ion transport
    Ding, Jie
    Wang, Zhongming
    Zhou, Shenggao
    [J]. JOURNAL OF COMPUTATIONAL PHYSICS, 2020, 418
  • [9] Positivity preserving finite difference methods for Poisson-Nernst-Planck equations with steric interactions: Application to slit-shaped nanopore conductance
    Ding, Jie
    Wang, Zhongming
    Zhou, Shenggao
    [J]. JOURNAL OF COMPUTATIONAL PHYSICS, 2019, 397
  • [10] Computational Study on Hysteresis of Ion Channels: Multiple Solutions to Steady-State Poisson-Nernst-Planck Equations
    Ding, Jie
    Sun, Hui
    Wang, Zhongming
    Zhou, Shenggao
    [J]. COMMUNICATIONS IN COMPUTATIONAL PHYSICS, 2018, 23 (05) : 1549 - 1572