Co-circulation of all the four Dengue virus serotypes during 2018-2019: first report from Eastern Uttar Pradesh, India

被引:14
作者
Behera, Sthita Pragnya [1 ]
Bhardwaj, Pooja [1 ]
Deval, Hirawati [1 ]
Srivastava, Neha [1 ]
Singh, Rajeev [1 ]
Misra, Brij Ranjan [1 ]
Agrawal, Awdhesh [2 ]
Kavathekar, Asif [1 ]
Kant, Rajni [1 ]
机构
[1] ICMR, Reg Med Res Ctr, Gorakhpur, Uttar Pradesh, India
[2] Gorakhnath Hosp, Div Pathol, Gorakhpur, Uttar Pradesh, India
关键词
Gorakhpur; Dengue; Serotype; E-UP; Genotype; Phylogeny; EMERGENCE; GENOTYPE; OUTBREAK; DENV-3; FEVER;
D O I
10.7717/peerj.14504
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Dengue fever is an endemic disease in India, transmitted by an infected mosquito bite. In India, the number of concurrent infections and the circulation of multiple dengue virus (DENV) serotypes has increased in recent decades. Molecular surveillance among the DENV serotype is important to keep track of the circulating serotypes, evolutionary changes, and key mutations that can alter the diagnostics. The current study included patients admitted for dengue in the Eastern Uttar Pradesh (E-UP) region during 2018-2019. The genetic characterization of the circulating DENV was accomplished through partial CprM (511 bp) gene amplification via reverse transcriptase polymerase chain reaction and sequencing. Phylogenetic analysis revealed the circulation of all four DENV1-4 serotypes. DENV-2 was the most abundant serotype (44%, 27/61), followed by DENV-3 (32%, 20/61). DENV-1 had a 16% (10/61) predominance, while DENV-4 (6%, 4/61) was found to be the least abundant serotype. DENV-2 genotypes were distributed among lineages I (7.4%), II (85%) and III (7.4%) of genotype IV, DENV-3 to lineage III of genotype III, DENV-1 to genotype III; DENV-2 to lineage B (75%) and C (25%) of genotype I. This primary report on the co-circulation of DENV1-4 serotypes from the E-UP region highlights the requirement of continuous molecular surveillance for monitoring circulating DENV serotypes.
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页数:17
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