Deep learning methods for oral cancer detection using Raman spectroscopy

被引:16
作者
Chang, Xiaohan [1 ]
Yu, Mingxin [1 ,2 ]
Liu, Renyu [1 ]
Jing, Rixing [1 ]
Ding, Jingya [3 ]
Xia, Jiabin [3 ]
Zhu, Zhihui [4 ]
Li, Xing [4 ]
Yao, Qifeng [5 ]
Zhu, Lianqing [1 ]
Zhang, Tao [4 ]
机构
[1] Beijing Informat Sci & Technol Univ, Minist Educ Optoelect Measurement Technol & Instru, Key Lab, Beijing 100192, Peoples R China
[2] Tsinghua Univ, Beijing Lab Biomed Detect Technol & Instrument, Beijing 100084, Peoples R China
[3] Hefei Univ Technol, Sch Instrument Sci & Optoelect Engn, Hefei 230009, Peoples R China
[4] Peking Union Med Coll Hosp, Dept stomatol, 1 Shuaifuyuan Wangfujing, Beijing 100730, Peoples R China
[5] Beijing Acad Quantum Informat Sci, Div Quantum State Matter, Beijing 100193, Peoples R China
基金
北京市自然科学基金; 中国国家自然科学基金;
关键词
Raman spectroscopy; Oral squamous cell carcinoma; Deep learning; Intelligent detection system; SQUAMOUS-CELL CARCINOMA; CLASSIFICATION; IDENTIFICATION; MARGINS;
D O I
10.1016/j.vibspec.2023.103522
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
The Raman spectroscopy analysis has been applied to the detection and research of oral cancer. One of the essential works in this technique is the Raman spectral data analysis method, which is mainly divided into two categories: traditional machine learning and deep learning. Especially, the deep learning method is proved that it could obtain higher accuracy in oral cancer identification than the traditional machine learning method. The purpose of this study is to test, compare, and analyze the performance of existing classical deep neural network models (AlexNet, VGGNet, ResNet50, MobileNetV2, Transformer) that recognize multiple types of oral cancer tissues. To achieve this goal, 16,200 Raman spectra are first collected from 180 tissue samples of 90 patients who have undergone a surgical resection due to tongue squamous cell carcinoma, gingival squamous cell carcinoma, and buccal squamous cell carcinoma. Then, the models are trained and predicted at the patient level. The experimental results demonstrate that the ResNet50 has the best performance in the identification of oral cancer tissue and normal tissue with an overall accuracy rate of 92.81%, an overall precision rate of 92.93%, and an overall recall rate of 92.86%. With this foundation, we further develop a prototype intelligent detection system with above five classical deep neural network models to realize multi-types of oral cancer tissue detection. Hopefully, our work can provide a guide for oral cancer detection using the deep learning method with Raman spectroscopy analysis and promote the development of clinical diagnosis system for oral cancer. The code is available at https://github.com/ISCLab-Bistu/deep-learning-for-OSCC.
引用
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页数:19
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