Cryo-EM structure of severe fever with thrombocytopenia syndrome virus

被引:20
作者
Du, Shouwen [1 ,2 ,3 ,4 ]
Peng, Ruchao [5 ]
Xu, Wang [6 ]
Qu, Xiaoyun [1 ,7 ]
Wang, Yuhang [2 ]
Wang, Jiamin [6 ]
Li, Letian [6 ]
Tian, Mingyao [6 ]
Guan, Yudong [2 ]
Wang, Jigang [2 ]
Wang, Guoqing [3 ,4 ]
Li, Hao [8 ]
Deng, Lingcong [6 ]
Shi, Xiaoshuang [6 ]
Ma, Yidan [6 ]
Liu, Fengting [2 ]
Sun, Minhua [1 ]
Wei, Zhengkai [1 ]
Jin, Ningyi [6 ]
Liu, Wei [8 ]
Qi, Jianxun [9 ,10 ]
Liu, Quan [1 ,3 ,4 ,11 ]
Liao, Ming [1 ,7 ]
Li, Chang [3 ,4 ,6 ]
机构
[1] Guangdong Acad Agr Sci, Inst Anim Hlth, Key Lab Livestock Dis Prevent Guangdong Prov, Sci Observat & Expt Stn Vet Drugs & Diagnost Tech, Guangzhou, Peoples R China
[2] Southern Univ Sci & Technol, Affiliated Hosp 1, Shenzhen Peoples Hosp, Shenzhen, Peoples R China
[3] Jilin Univ, Hosp 1, Dept Infect Dis, Changchun, Peoples R China
[4] Jilin Univ, Hosp 1, Ctr Infect Dis & Pathogen Biol, Key Lab Organ Regenerat & Transplantat,Minist Educ, Changchun, Peoples R China
[5] Univ Penn, Perelman Sch Med, Dept Biochem & Biophys, Philadelphia, PA USA
[6] Chinese Acad Agr Sci, Changchun Vet Res Inst, Chinese Acad Med Sci, Res Unit Key Technol Prevent & Control Virus Zoono, Changchun, Peoples R China
[7] South China Agr Univ, Key Lab Zoonosis Minist Agr & Rural Affairs, Guangzhou, Peoples R China
[8] Beijing Inst Microbiol & Epidemiol, State Key Lab Pathogen & Biosecur, Beijing, Peoples R China
[9] Chinese Acad Sci, Inst Microbiol, CAS Key Lab Pathogen Microbiol & Immunol, Beijing, Peoples R China
[10] Univ Chinese Acad Sci, Savaid Med Sch, Beijing, Peoples R China
[11] Foshan Univ, Guangdong Acad Sci, Inst Zool, Guangdong Key Lab Anim Conservat & Resource Utiliz, Foshan, Peoples R China
基金
中国国家自然科学基金;
关键词
ENVELOPE GLYCOPROTEIN; DC-SIGN; VISUALIZATION; IDENTIFICATION; BUNYAVIRUS; RECEPTOR; ENTRY;
D O I
10.1038/s41467-023-41804-7
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The severe fever with thrombocytopenia syndrome virus (SFTSV) is a tick-borne human-infecting bunyavirus, which utilizes two envelope glycoproteins, Gn and Gc, to enter host cells. However, the structure and organization of these glycoproteins on virion surface are not yet known. Here we describe the structure of SFTSV determined by single particle reconstruction, which allows mechanistic insights into bunyavirus assembly at near-atomic resolution. The SFTSV Gn and Gc proteins exist as heterodimers and further assemble into pentameric and hexameric peplomers, shielding the Gc fusion loops by both intra- and inter-heterodimer interactions. Individual peplomers are associated mainly through the ectodomains, in which the highly conserved glycans on N914 of Gc play a crucial role. This elaborate assembly stabilizes Gc in the metastable prefusion conformation and creates some cryptic epitopes that are only accessible in the intermediate states during virus entry. These findings provide an important basis for developing vaccines and therapeutic drugs. The severe fever with thrombocytopenia syndrome virus (SFTSV, officially named Dabie bandavirus) is a tick-borne human-infecting bunyavirus. Here, the authors report the cryo-EM structure of SFTSV virion, and discuss the mechanisms of viral assembly, membrane fusion and antibody neutralization.
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页数:14
相关论文
共 62 条
[1]   PHENIX: a comprehensive Python']Python-based system for macromolecular structure solution [J].
Adams, Paul D. ;
Afonine, Pavel V. ;
Bunkoczi, Gabor ;
Chen, Vincent B. ;
Davis, Ian W. ;
Echols, Nathaniel ;
Headd, Jeffrey J. ;
Hung, Li-Wei ;
Kapral, Gary J. ;
Grosse-Kunstleve, Ralf W. ;
McCoy, Airlie J. ;
Moriarty, Nigel W. ;
Oeffner, Robert ;
Read, Randy J. ;
Richardson, David C. ;
Richardson, Jane S. ;
Terwilliger, Thomas C. ;
Zwart, Peter H. .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2010, 66 :213-221
[2]   New Anti-Flavivirus Fusion Loop Human Antibodies with Zika Virus-Neutralizing Potential [J].
Alves de Oliveira Franca, Renato Kaylan ;
Silva, Jacyelle Medeiros ;
Rodrigues, Lucas Silva ;
Sokolowskei, Dimitri ;
Brigido, Marcelo Macedo ;
Maranhao, Andrea Queiroz .
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2022, 23 (14)
[3]   Cryo-EM Structure of Chikungunya Virus in Complex with the Mxra8 Receptor [J].
Basore, Katherine ;
Kim, Arthur S. ;
Nelson, Christopher A. ;
Zhang, Rong ;
Smith, Brittany K. ;
Uranga, Carla ;
Vang, Lo ;
Cheng, Ming ;
Gross, Michael L. ;
Smith, Jonathan ;
Diamond, Michael S. ;
Fremont, Daved H. .
CELL, 2019, 177 (07) :1725-+
[4]   MolProbity: all-atom structure validation for macromolecular crystallography [J].
Chen, Vincent B. ;
Arendall, W. Bryan, III ;
Headd, Jeffrey J. ;
Keedy, Daniel A. ;
Immormino, Robert M. ;
Kapral, Gary J. ;
Murray, Laura W. ;
Richardson, Jane S. ;
Richardson, David C. .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2010, 66 :12-21
[5]   Determining structures in a native environment using single-particle cryoelectron microscopy images [J].
Cheng, Jing ;
Li, Bufan ;
Si, Long ;
Zhang, Xinzheng .
INNOVATION, 2021, 2 (04)
[6]   Structures of the Zika Virus Envelope Protein and Its Complex with a Flavivirus Broadly Protective Antibody [J].
Dai, Lianpan ;
Song, Jian ;
Lu, Xishan ;
Deng, Yong-Qiang ;
Musyoki, Abednego Moki ;
Cheng, Huijun ;
Zhang, Yanfang ;
Yuan, Yuan ;
Song, Hao ;
Haywood, Joel ;
Xiao, Haixia ;
Yan, Jinghua ;
Shi, Yi ;
Qin, Cheng-Feng ;
Qi, Jianxun ;
Gao, George F. .
CELL HOST & MICROBE, 2016, 19 (05) :696-704
[7]   A Broadly Flavivirus Cross-Neutralizing Monoclonal Antibody that Recognizes a Novel Epitope within the Fusion Loop of E Protein [J].
Deng, Yong-Qiang ;
Dai, Jian-Xin ;
Ji, Guang-Hui ;
Jiang, Tao ;
Wang, Hua-Jing ;
Yang, Hai-ou ;
Tan, Weng-Long ;
Liu, Ran ;
Yu, Man ;
Ge, Bao-Xue ;
Zhu, Qing-Yu ;
Qin, E-De ;
Guo, Ya-Jun ;
Qin, Cheng-Feng .
PLOS ONE, 2011, 6 (01)
[8]   Crystal structure of glycoprotein C from Rift Valley fever virus [J].
Dessau, Moshe ;
Modis, Yorgo .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2013, 110 (05) :1696-1701
[9]   The Many Faces of a Dynamic Virion: Implications of Viral Breathing on Flavivirus Biology and Immunogenicity [J].
Dowd, Kimberly A. ;
Pierson, Theodore C. .
ANNUAL REVIEW OF VIROLOGY, VOL 5, 2018, 5 :185-207
[10]  
ELLIOTT R.M., 2013, Fields Virology, V6