Genome-Wide Identification and Expression Pattern of MYB Family Transcription Factors in Erianthus fulvus

被引:5
作者
Rao, Xibing [1 ]
Qian, Zhenfeng [1 ]
Xie, Linyan [1 ]
Wu, Huaying [1 ]
Luo, Quan [1 ]
Zhang, Qiyue [1 ]
He, Lilian [1 ]
Li, Fusheng [1 ,2 ,3 ]
机构
[1] Yunnan Agr Univ, Coll Agron & Biotechnol, Kunming 650201, Peoples R China
[2] Key Lab Crop Prod & Smart Agr Yunnan Prov, Kunming 650201, Peoples R China
[3] Yunnan Agr Univ, Sugarcane Res Inst, Kunming 650201, Peoples R China
关键词
sugarcane; Erianthus fulvus; MYB transcription factor; gene expression; COLD TOLERANCE; FACTOR SUPERFAMILY; SALT STRESS; ARABIDOPSIS; GENE; DROUGHT; PROTEIN; SOFTWARE; DATABASE;
D O I
10.3390/genes14122128
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
MYB family genes have many functions and are widely involved in plant abiotic-stress responses. Erianthus fulvus is an important donor material for stress-resistance genes in sugarcane breeding. However, the MYB family genes in E. fulvus have not been systematically investigated. In this study, 133 EfMYB genes, including 48 Ef1R-MYB, 84 EfR2R3-MYB and 1 Ef3R-MYB genes, were identified in the E. fulvus genome. Among them, the EfR2R3-MYB genes were classified into 20 subgroups. In addition, these EfMYB genes were unevenly distributed across 10 chromosomes. A total of 4 pairs of tandemly duplicated EfMYB genes and 21 pairs of segmentally duplicated EfMYB genes were identified in the E. fulvus genome. Protein-interaction analysis predicted that 24 EfMYB proteins had potential interactions with 14 other family proteins. The EfMYB promoter mainly contains cis-acting elements related to the hormone response, stress response, and light response. Expression analysis showed that EfMYB39, EfMYB84, and EfMYB124 could be significantly induced using low-temperature stress. EfMYB30, EfMYB70, EfMYB81, and EfMYB101 responded positively to drought stress. ABA treatment significantly induced EfMYB1, EfMYB30, EfMYB39, EfMYB84, and EfMYB130. All nine genes were induced using MeJA treatment. These results provide comprehensive information on EfMYB genes and can serve as a reference for further studies of gene function.
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页数:23
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