Model-independent embedding of directed networks into Euclidean and hyperbolic spaces

被引:7
作者
Kovacs, Bianka [1 ]
Palla, Gergely [1 ,2 ]
机构
[1] Eotvos Lorand Univ, Dept Biol Phys, Pazmany P stny 1 A, H-1117 Budapest, Hungary
[2] Semmelweis Univ, Hlth Serv Management Training Ctr, Data Driven Hlth Div, Natl Lab Hlth Secur, Kutvolgy ut 2, H-1125 Budapest, Hungary
关键词
SMALL-WORLD; STOCHASTIC BLOCKMODELS; GRAPH;
D O I
10.1038/s42005-023-01143-x
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
The arrangement of network nodes in hyperbolic spaces has become a widely studied problem, motivated by numerous results suggesting the existence of hidden metric spaces behind the structure of complex networks. Although several methods have already been developed for the hyperbolic embedding of undirected networks, approaches able to deal with directed networks are still in their infancy. Here, we present a framework based on the dimension reduction of proximity matrices reflecting the network topology, coupled with a general conversion method transforming Euclidean node coordinates into hyperbolic ones even for directed networks. While proposing a measure of proximity based on the shortest path length, we also incorporate an earlier Euclidean embedding method in our pipeline, demonstrating the widespread applicability of our Euclidean-hyperbolic conversion. Besides, we introduce a dimension reduction technique that maps the nodes directly into the hyperbolic space of any number of dimensions with the aim of reproducing a distance matrix measured on the given (un)directed network. According to various commonly used quality scores, our methods are capable of producing high-quality embeddings for several real networks. Numerous results support that networks representing the structure of complex systems can be accompanied by hidden metric spaces. The present paper introduces a framework for embedding directed networks into hyperbolic spaces using dimension reduction techniques and a universal conversion method between Euclidean and hyperbolic node coordinates.
引用
收藏
页数:16
相关论文
共 77 条
[1]  
Adamic Lada., 2005, P 3 INT WORKSHOP LIN, P36, DOI DOI 10.1145/1134271.1134277
[2]  
Alanis-Lobato Gregorio, 2016, Appl Netw Sci, V1, P10, DOI [10.1007/s41109-016-0013-0, 10.1007/s41109-016-0013-0]
[3]   Efficient embedding of complex networks to hyperbolic space via their Laplacian [J].
Alanis-Lobato, Gregorio ;
Mier, Pablo ;
Andrade-Navarro, Miguel A. .
SCIENTIFIC REPORTS, 2016, 6
[4]   Statistical mechanics of complex networks [J].
Albert, R ;
Barabási, AL .
REVIEWS OF MODERN PHYSICS, 2002, 74 (01) :47-97
[5]  
Balogh S. G., 2022, ARXIV, DOI DOI 10.48550/ARXIV.2206.08773
[6]   Emergence of scaling in random networks [J].
Barabási, AL ;
Albert, R .
SCIENCE, 1999, 286 (5439) :509-512
[7]  
Barrat A., 2008, Dynamical Processes on Complex Networks, DOI [10.1017/CBO9780511791383, DOI 10.1017/CBO9780511791383]
[8]  
Belkin M, 2002, ADV NEUR IN, V14, P585
[9]   Interdisciplinary and physics challenges of network theory [J].
Bianconi, Ginestra .
EPL, 2015, 111 (05)
[10]   Sustaining the Internet with hyperbolic mapping [J].
Boguna, Marian ;
Papadopoulos, Fragkiskos ;
Krioukov, Dmitri .
NATURE COMMUNICATIONS, 2010, 1