Molecular structure determination, spectroscopic, quantum computational studies and molecular docking of 4-(E)-[2-(benzylamino)phenylimino) methyl-2]ethoxy phenol

被引:12
作者
Ahmad, Hajam Towseef [1 ]
Ameen, K. K. Mohammed [2 ]
Saleem, H. [1 ]
Padusha, M. Syed Ali [2 ]
Ahamed, F. M. Mashood [2 ]
机构
[1] Annamalai Univ, Dept Phys, Annamalainagar, Tamil Nadu, India
[2] Jamal Mohamed Coll, PG & Res Dept Chem, Trichy, Tamil Nadu, India
关键词
Schiff base; molecular docking; natural bond orbital; non-linear optical; DENSITY-FUNCTIONAL-THEORY; SCHIFF-BASE LIGANDS; HARTREE-FOCK; CRYSTAL-STRUCTURE; DFT CALCULATIONS; AB-INITIO; X-RAY; COMPLEXES; ANTIBACTERIAL; ANTIFUNGAL;
D O I
10.1080/07391102.2022.2052354
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A Schiff base compound 4-(E)-[2-(benzylamino)phenylimino)methyl-2]ethoxy phenol (4BPM2EP) was synthesized and spectroscopic characterization was performed using experimental methods such as FT-IR, FT-Raman and UV-Vis spectroscopy. Density functional theory (DFT/B3LYP/6-311++G(d,p)) computation was used to investigate the optimized molecular geometry, harmonic vibrational wavenumber, NMR chemical shifts, natural bond orbital (NBO) analysis, non-linear optical (NLO) properties, molecular electrostatic potential (MEP) map and Mulliken atomic charges of 4BPM2EP molecule. TD-DFT calculations have been carried out on the optimized geometry at gaseous phase, DMSO and ethanol to further understand the electronic transitions and solvents effect on the UV-Vis spectra of the compound. The assignments of vibrational modes were performed on the basis of total energy distribution (TED) using VEDA 4 program and were compared with experimental data. Molecular docking study was performed using Glide program to establish the information about the interactions between the topoisomerase DNA gyrase enzymes and the novel compound in order to explore the biological behaviour of the examined compound. The compound screened against four pathogens two gram positive, two gram negative and two fungal strains had shown good anti-bacterial and antifungal behaviour. Furthermore the compound was subjected to in-silico ADMET studies. Communicated by Ramaswamy H. Sarma
引用
收藏
页码:3574 / 3590
页数:17
相关论文
共 84 条
[41]   DEVELOPMENT OF THE COLLE-SALVETTI CORRELATION-ENERGY FORMULA INTO A FUNCTIONAL OF THE ELECTRON-DENSITY [J].
LEE, CT ;
YANG, WT ;
PARR, RG .
PHYSICAL REVIEW B, 1988, 37 (02) :785-789
[42]  
Lee S., 2003, EuroQSAR 2002 Designing Drugs and Crop Protectants: Processes, Problems and Solutions, V2003, P418, DOI DOI 10.3389/FBIOE.2019.00214/FULL
[43]   Solving molecular flexible docking problems with metaheuristics: A comparative study [J].
Lopez-Camacho, Esteban ;
Garcia Godoy, Maria Jesus ;
Garcia-Nieto, Jose ;
Nebro, Antonio J. ;
Aldana-Montes, Jose F. .
APPLIED SOFT COMPUTING, 2015, 28 :379-393
[44]   Dimeric structure and hydrogen bonds in 2-N-ethylamino-5-metyl-4-nitro-pyridine studied by XRD, IR and Raman methods and DFT calculations [J].
Lorenc, J. .
VIBRATIONAL SPECTROSCOPY, 2012, 61 :112-123
[45]   Fr-IR, Fr-Raman and DFT calculations of 4-chloro-2-(3,4-dichlorophenylcarbamoyl)phenyl acetate [J].
Madhavan, V. S. ;
Varghese, Hema Tresa ;
Mathew, Samuel ;
Vinsova, Jarmila ;
Panicker, C. Yohannan .
SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 2009, 72 (03) :547-553
[46]   An evaluation of harmonic vibrational frequency scale factors [J].
Merrick, Jeffrey P. ;
Moran, Damian ;
Radom, Leo .
JOURNAL OF PHYSICAL CHEMISTRY A, 2007, 111 (45) :11683-11700
[47]   Optimized geometry and vibrational spectra and NBO analysis of solid state 2,4,6-tri-fluorobenzoic acid hydrogen bonded dimer [J].
Mukherjee, V. ;
Singh, N. P. ;
Yadav, R. A. .
JOURNAL OF MOLECULAR STRUCTURE, 2011, 988 (1-3) :24-34
[48]   Modeling of protonation processes in acetohydroxamic acid [J].
Muñoz-Caro, C ;
Niño, A ;
Senent, ML ;
Leal, JM ;
Ibeas, S .
JOURNAL OF ORGANIC CHEMISTRY, 2000, 65 (02) :405-410
[49]   Synthesis and biological evaluation of schiff bases of 4-aminophenazone as an anti-inflammatory, analgesic and antipyretic agent [J].
Murtaza, Shahzad ;
Akhtar, Muhammad Shoaib ;
Kanwal, Farina ;
Abbas, Aadil ;
Ashiq, Shoaib ;
Shamim, Saima .
JOURNAL OF SAUDI CHEMICAL SOCIETY, 2017, 21 :S359-S372
[50]   A SYSTEMATIC COMPARISON OF MOLECULAR-PROPERTIES OBTAINED USING HARTREE-FOCK, A HYBRID HARTREE-FOCK DENSITY-FUNCTIONAL-THEORY, AND COUPLED-CLUSTER METHODS [J].
OLIPHANT, N ;
BARTLETT, RJ .
JOURNAL OF CHEMICAL PHYSICS, 1994, 100 (09) :6550-6561