Single cell and spatial sequencing define processes by which keratinocytes and fibroblasts amplify inflammatory responses in psoriasis

被引:123
作者
Ma, Feiyang [1 ,2 ,3 ]
Plazyo, Olesya [2 ]
Billi, Allison C. C.
Tsoi, Lam C. C.
Xing, Xianying [2 ]
Wasikowski, Rachael [2 ]
Gharaee-Kermani, Mehrnaz [2 ]
Hile, Grace [2 ]
Jiang, Yanyun [2 ]
Harms, Paul W. W. [2 ,4 ]
Xing, Enze [2 ]
Kirma, Joseph [2 ]
Xi, Jingyue [5 ]
Hsu, Jer-En [5 ]
Sarkar, Mrinal K. K. [2 ]
Chung, Yutein [2 ]
Di Domizio, Jeremy [6 ]
Gilliet, Michel [6 ]
Ward, Nicole L. L.
Maverakis, Emanual [7 ]
Klechevsky, Eynav [8 ]
Voorhees, John J. J.
Elder, James T. T. [2 ,9 ]
Lee, Jun Hee [5 ]
Kahlenberg, J. Michelle [1 ,2 ]
Pellegrini, Matteo
Modlin, Robert L. L.
Gudjonsson, Johann E. E. [2 ]
机构
[1] Univ Michigan, Dept Internal Med, Div Rheumatol, Ann Arbor, MI 48109 USA
[2] Univ Michigan, Dept Dermatol, Ann Arbor, MI 48109 USA
[3] Univ Michigan, Dept Computat Med & Bioinformat, Ann Arbor, MI 48109 USA
[4] Univ Michigan, Dept Pathol, Ann Arbor, MI 48109 USA
[5] Univ Michigan Med Sch, Dept Mol & Integrat Physiol, Ann Arbor, MI 48109 USA
[6] Univ Hosp Lausanne, Dept Dermatol, CH-1011 Lausanne, Switzerland
[7] Univ Calif Davis, Dept Dermatol, Sacramento, CA USA
[8] Washington Univ, Dept Pathol & Immunol, Sch Med, St Louis, MO 63110 USA
[9] Ann Arbor Vet Affairs Med Ctr, Ann Arbor, MI 48105 USA
基金
瑞士国家科学基金会; 新加坡国家研究基金会;
关键词
CD8(+) T-CELLS; GROWTH-FACTOR; LANGERHANS CELL; DENDRITIC CELLS; LESIONAL SKIN; IFN-GAMMA; DIFFERENTIATION; EXPRESSION; EFFECTOR; PROLIFERATION;
D O I
10.1038/s41467-023-39020-4
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Changes in Psoriasis and other inflammatory skin diseases during severity stages can be investigated using single cell and spatial transcriptomics. Here the authors compare different inflammatory skin diseases to emphasise differences in immune cells and inflammatory markers particularly keratinocytes and fibroblasts. The immunopathogenesis of psoriasis, a common chronic inflammatory disease of the skin, is incompletely understood. Here we demonstrate, using a combination of single cell and spatial RNA sequencing, IL-36 dependent amplification of IL-17A and TNF inflammatory responses in the absence of neutrophil proteases, which primarily occur within the supraspinous layer of the psoriatic epidermis. We further show that a subset of SFRP2(+) fibroblasts in psoriasis contribute to amplification of the immune network through transition to a pro-inflammatory state. The SFRP2(+) fibroblast communication network involves production of CCL13, CCL19 and CXCL12, connected by ligand-receptor interactions to other spatially proximate cell types: CCR2(+) myeloid cells, CCR7(+)LAMP3(+) dendritic cells, and CXCR4 expressed on both CD8(+) Tc17 cells and keratinocytes, respectively. The SFRP2(+) fibroblasts also express cathepsin S, further amplifying inflammatory responses by activating IL-36G in keratinocytes. These data provide an in-depth view of psoriasis pathogenesis, which expands our understanding of the critical cellular participants to include inflammatory fibroblasts and their cellular interactions.
引用
收藏
页数:19
相关论文
共 71 条
[11]   Transcriptional Programming of Normal and Inflamed Human Epidermis at Single-Cell Resolution [J].
Cheng, Jeffrey B. ;
Sedgewick, Andrew J. ;
Finnegan, Alex, I ;
Harirchian, Paymann ;
Lee, Jerry ;
Kwon, Sunjong ;
Fassett, Marlys S. ;
Golovato, Justin ;
Gray, Matthew ;
Ghadially, Ruby ;
Liao, Wilson ;
White, Bethany E. Perez ;
Mauro, Theodora M. ;
Mully, Thaddeus ;
Kim, Esther A. ;
Sbitany, Hani ;
Neuhaus, Isaac M. ;
Grekin, Roy C. ;
Yu, Siegrid S. ;
Gray, Joe W. ;
Purdom, Elizabeth ;
Paus, Ralf ;
Vaske, Charles J. ;
Benz, Stephen C. ;
Song, Jun S. ;
Cho, Raymond J. .
CELL REPORTS, 2018, 25 (04) :871-883
[12]   Microscopic examination of spatial transcriptome using Seq-Scope [J].
Cho, Chun-Seok ;
Xi, Jingyue ;
Si, Yichen ;
Park, Sung-Rye ;
Hsu, Jer-En ;
Kim, Myungjin ;
Jun, Goo ;
Kang, Hyun Min ;
Lee, Jun Hee .
CELL, 2021, 184 (13) :3559-+
[13]  
Coondoo Arijit, 2012, Indian J Dermatol, V57, P90, DOI 10.4103/0019-5154.94272
[14]   Impaired Langerhans cell migration in psoriasis [J].
Cumberbatch, M ;
Singh, M ;
Dearman, RJ ;
Young, HS ;
Kimber, I ;
Griffiths, CEM .
JOURNAL OF EXPERIMENTAL MEDICINE, 2006, 203 (04) :953-960
[15]   The IL23R R381Q Gene Variant Protects against Immune-Mediated Diseases by Impairing IL-23-Induced Th17 Effector Response in Humans [J].
Di Meglio, Paola ;
Di Cesare, Antonella ;
Laggner, Ute ;
Chu, Chung-Ching ;
Napolitano, Luca ;
Villanova, Federica ;
Tosi, Isabella ;
Capon, Francesca ;
Trembath, Richard C. ;
Peris, Ketty ;
Nestle, Frank O. .
PLOS ONE, 2011, 6 (02)
[16]   Human keratinocytes that express hTERT and also bypass a p16INK4a-enforced mechanism that limits life span become immortal yet retain normal growth and differentiation characteristics [J].
Dickson, MA ;
Hahn, WC ;
Ino, Y ;
Ronfard, V ;
Wu, JY ;
Weinberg, RA ;
Louis, DN ;
Li, FP ;
Rheinwald, JG .
MOLECULAR AND CELLULAR BIOLOGY, 2000, 20 (04) :1436-1447
[17]   CellPhoneDB: inferring cell-cell communication from combined expression of multi-subunit ligand-receptor complexes [J].
Efremova, Mirjana ;
Vento-Tormo, Miquel ;
Teichmann, Sarah A. ;
Vento-Tormo, Roser .
NATURE PROTOCOLS, 2020, 15 (04) :1484-1506
[18]   Human Langerhans Cells with Pro-inflammatory Features Relocate within Psoriasis Lesions [J].
Eidsmo, Liv ;
Martini, Elisa .
FRONTIERS IN IMMUNOLOGY, 2018, 9
[19]   Molecular Dissection of Psoriasis: Integrating Genetics and Biology [J].
Elder, James T. ;
Bruce, Allen T. ;
Gudjonsson, Johann E. ;
Johnston, Andrew ;
Stuart, Philip E. ;
Tejasvi, Trilokraj ;
Voorhees, John J. ;
Abecasis, Goncalo R. ;
Nair, Rajan P. .
JOURNAL OF INVESTIGATIVE DERMATOLOGY, 2010, 130 (05) :1213-1226
[20]  
Finch PW, 1997, AM J PATHOL, V151, P1619