African swine fever virus P72 genotyping tool

被引：3

作者：

Dinhobl, Mark ^{[1
,2
,3
]}

Spinard, Edward ^{[1
,2
,3
]}

Birtley, Hillary ^{[2
,3
,4
]}

Tesler, Nicolas ^{[2
,3
,4
]}

Borca, Manuel V. ^{[1
,2
,3
]}

Gladue, Douglas P. ^{[1
,2
,3
]}

机构：

[1] ARS, USDA, Foreign Anim Dis Res Unit, Natl Bio & Agrodef Facil, Manhattan, KS 66502 USA

[2] ARS, USDA, Foreign Anim Dis Res Unit, Plum Isl Anim Dis Ctr, Orient, NY 11957 USA

[3] Ctr Excellence African Swine fever Genom, Guilford, CT 06437 USA

[4] Oak Ridge Inst Sci & Educ ORISE, Oak Ridge, TN USA

来源：

MICROBIOLOGY RESOURCE ANNOUNCEMENTS | 2024年 / 13卷 / 02期

关键词：

ASFV; African swine fever; ASF; African swine fever virus; P72; tool; genotyping; swine;

D O I：

10.1128/mra.00891-23

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

Historically, genotyping of African swine fever virus was based on partial sequencing of B646L (p72). Until recently, the number of differences that defined genotypes was ambiguous. This tool allows a sequence to be uploaded and will report its closest matches along with its likely p72 genotype.

引用

页数：3

共 3 条

[1] ALTSCHUL SF, 1990, J MOL BIOL, V215, P403, DOI 10.1006/jmbi.1990.9999
[2] A Re-Evaluation of African Swine Fever Genotypes Based on p72 Sequences Reveals the Existence of Only Six Distinct p72 Groups
Spinard, Edward
Dinhobl, Mark
Tesler, Nicolas
Birtley, Hillary
Signore, Anthony V.
Ambagala, Aruna
Masembe, Charles
Borca, Manuel V.
Gladue, Douglas P.
[J]. VIRUSES-BASEL, 2023, 15 (11):
[3] Strong sequence conservation of African swine fever virus p72 protein provides the molecular basis for its antigenic stability
Yu, M
Morrissy, CJ
Westbury, HA
[J]. ARCHIVES OF VIROLOGY, 1996, 141 (09) : 1795 - 1802

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