Complete mitochondrial genome of Parasa sinica: New insights into the phylogeny of Limacodidae

被引:2
作者
Zhang, Si-Pei [1 ]
Zhang, Jie [1 ]
Xu, Jie [2 ]
Wang, Qing-Hao [1 ]
Ye, Yang [1 ]
Wang, Gang [1 ]
Zhang, Hua-Bin [1 ]
Zhang, Dai-Zhen [1 ]
Tang, Bo-Ping [1 ,3 ]
Liu, Qiu-Ning [1 ,3 ]
机构
[1] Yancheng Teachers Univ, Jiangsu Synthet Innovat Ctr Coastal Bioagr, Jiangsu Key Lab Bioresources Saline Soils, Sch Wetlands,Jiangsu Prov Key Lab Coastal Wetland, Yancheng 224007, Peoples R China
[2] Wenzhou Med Univ, Sch Pharmaceut Sci, Wenzhou 325000, Peoples R China
[3] Yancheng Teachers Univ, Sch Wetland, Yancheng 224007, Peoples R China
关键词
Parasa sinica; Phylogeny; Mitochondrial genome; Zygaenoidea; MAXIMUM-LIKELIHOOD; SEQUENCE DATA; LEPIDOPTERA; EVOLUTION; ORGANIZATION; SELECTION; PATTERNS; PROGRAM; MOTHS;
D O I
10.1016/j.heliyon.2023.e21375
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
In this study, the whole mitochondrial genome (mitogenome) of Parasa sinica was sequenced. It contains 15,306 base pairs (bp), 13 protein-coding genes (PCGs), two ribosomal RNAs (rRNAs), 22 transfer RNAs (tRNAs), and one non-coding regulatory area (CR), all of which are shared by other lepidopterans. It follows the same gene order as ordinary lepidopterans. Further, out of these 37 genes, 23 are present on the heavy strand whereas the remaining 14 are located on the light strand. The A + T composition of the mitogenome is relatively high. Although P. sinica has a negative AT-skew and GC-skew, the GC-skew value is significantly lower than the AT-skew value. All PCGs, with the exception of CO1, carry the same start codon (ATN). All tRNAs exhibit the usual cloverleaf secondary structure. We identified the conserved motif "ATAGA + poly-T '' found in other lepidopteran insects at the beginning of the CR. We collected the concatenated PCGs sequences in the mitochondrial genome of 15 species of Zygaenoidea, with the sequences of Geometridae as outgroups, including P. sinica, and constructed phylogenetic trees using Bayesian inference (BI) and maximum likelihood (ML) methods. The monolineage of each superfamily is usually well supported. Based on phylogenetic analysis, P. sinica is a member of family Limacodidae, strongly supporting the monophyly of the Zygaenoidea groups.
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页数:9
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