Pragmatic applications of DNA barcoding markers in identification of fish species - a review

被引:5
作者
Naz, Saima [1 ]
Chatha, Ahmad Manan Mustafa [1 ]
Khan, Rifat Ullah [2 ]
机构
[1] Govt Sadiq Coll Women Univ, Dept Zool, Bahawalpur, Pakistan
[2] Univ Agr, Coll Vet Sci, Fac Anim Husb Vet Sci, Peshawar, Pakistan
关键词
DNA Barcoding; DNA mini barcoding; meta-barcoding; Cytochrome c Oxidase I; authentication; FRESH-WATER FISHES; RESOLUTION MELTING ANALYSIS; MOLECULAR-IDENTIFICATION; PERCIFORMES SILLAGINIDAE; PRODUCTS SOLD; CYTOCHROME-B; FOOD; SEAFOOD; MITOCHONDRIAL; DIVERSITY;
D O I
10.2478/aoas-2022-0073
中图分类号
S8 [畜牧、 动物医学、狩猎、蚕、蜂];
学科分类号
0905 ;
摘要
DNA barcoding and mini barcoding involve Cytochrome Oxidase Subunit I (COI) gene in mitochondrial genome and is used for accurate identification of species and biodiversity. The basic goal of the current study is to develop a complete reference database of fishes. It also evaluates the applicability of COI gene to identify fish at the species level with other aspects i.e., as Kimura 2 parameter (K2P) distance. The mean observed length of the sequence was ranging between 500 to 700 base pairs for fish species in DNA barcoding and 80 to 650 base pairs for DNA mini barcoding. This method describes the status of known to unknown samples but it also facilitates the detection of previously un-sampled species at distinct level. So, mini-barcoding is a method focuses on the analysis of short-length DNA markers has been demonstrated to be effective for species identification of processed food containing degraded DNA. While DNA meta-barcoding refers to the automated identification of multiple species from a single bulk sample. The may contain entire organisms or a single environmental sample containing degraded DNA. Despite DNA barcoding, mini barcoding and meta-barcoding are efficient methods for species identification which are helpful in conservation and proper management of biodiversity. It aids researchers to take an account of genetic as well as evolutionary relationships by collecting their morphological, distributional and molecular data. Overall, this paper discusses DNA barcoding technology and how it has been used to various fish species, as well as its universality, adaptability, and novel approach to DNA-based species identification.
引用
收藏
页码:363 / 389
页数:27
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