Activationless Electron Transfer of Redox-DNA in Electrochemical Nanogaps

被引:5
作者
Zheng, Zhiyong [1 ]
Grall, Simon [2 ]
Kim, Soo Hyeon [2 ]
Chovin, Arnaud [1 ]
Clement, Nicolas [2 ,3 ]
Demaille, Christophe [1 ]
机构
[1] Univ Paris Cite, CNRS, Lab Electrochim Mol, F-75013 Paris, France
[2] Univ Tokyo, IIS, LIMMS, CNRS IIS UMI2820, Tokyo 1538505, Japan
[3] LAAS, F-31400 Toulouse, France
关键词
SINGLE-STRANDED-DNA; TRANSFER KINETICS; PERSISTENCE LENGTHS; CYCLIC VOLTAMMETRY; BLOOD-SERUM; DYNAMICS; END; MOLECULES; DIFFUSION; SURFACES;
D O I
10.1021/jacs.3c13532
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Our recent discovery of decreased reorganization energy in electrode-tethered redox-DNA systems prompts inquiries into the origin of this phenomenon and suggests its potential use to lower the activation energy of electrochemical reactions. Here, we show that the confinement of the DNA chain in a nanogap amplifies this effect to an extent to which it nearly abolishes the intrinsic activation energy of electron transfer. Employing electrochemical atomic force microscopy (AFM-SECM), we create sub-10 nm nanogaps between a planar electrode surface bearing end-anchored ferrocenylated DNA chains and an incoming microelectrode tip. The redox cycling of the DNA's ferrocenyl (Fc) moiety between the surface and the tip generates a measurable current at the scale of similar to 10 molecules. Our experimental findings are rigorously interpreted through theoretical modeling and original molecular dynamics simulations (Q-Biol code). Several intriguing findings emerge from our investigation: (i) The electron transport resulting from DNA dynamics is many times faster than predicted by simple diffusion considerations. (ii) The current in the nanogap is solely governed by the electron transfer rate at the electrodes. (iii) This rate rapidly saturates as overpotentials applied to the nanogap electrodes increase, implying near-complete suppression of the reorganization energy for the oxidation/reduction of the Fc heads within confined DNA. Furthermore, evidence is presented that this may constitute a general, previously unforeseen, behavior of redox polymer chains in electrochemical nanogaps.
引用
收藏
页码:6094 / 6103
页数:10
相关论文
共 69 条
[1]   Probing the structure and dynamics of end-grafted flexible polymer chain layers by combined atomic force-electrochemical microscopy. Cyclic voltammetry within nanometer-thick macromolecular poly(ethylene glycol) layers [J].
Abbou, J ;
Anne, A ;
Demaille, C .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2004, 126 (32) :10095-10108
[2]   Unmediated by DNA Electron Transfer in Redox-Labeled DNA Duplexes End-Tethered to Gold Electrodes [J].
Abi, Alireza ;
Ferapontova, Elena E. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2012, 134 (35) :14499-14507
[3]   THIN-LAYER ELECTROCHEMISTRY - STEADY-STATE METHODS OF STUDYING RATE PROCESSES [J].
ANDERSON, LB ;
REILLEY, CN .
JOURNAL OF ELECTROANALYTICAL CHEMISTRY, 1965, 10 (04) :295-&
[4]   Dynamics of electron transport by elastic bending of short DNA duplexes.: Experimental study and quantitative modeling of the cyclic voltammetric behavior of 3′-ferrocenyl DNA end-grafted on gold [J].
Anne, A ;
Demaille, C .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2006, 128 (02) :542-557
[5]   3′-ferrocene-labeled oligonucleotide chains end-tethered to gold electrode surfaces:: Novel model systems for exploring flexibility of short DNA using cyclic voltammetry [J].
Anne, A ;
Bouchardon, A ;
Moiroux, J .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2003, 125 (05) :1112-1113
[6]   Enzymatic redox 3′-end-labeling of DNA oligonucleotide monolayers on gold surfaces using terminal deoxynucleotidyl transferase (TdT)-mediated single base extension [J].
Anne, Agnes ;
Bonnaudat, Christelle ;
Demaille, Christophe ;
Wang, Kang .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2007, 129 (10) :2734-+
[7]   Touching Surface-Attached Molecules with a Microelectrode: Mapping the Distribution of Redox-Labeled Macromolecules by Electrochemical-Atomic Force Microscopy [J].
Anne, Agnes ;
Cambril, Edmond ;
Chovin, Arnaud ;
Demaille, Christophe .
ANALYTICAL CHEMISTRY, 2010, 82 (15) :6353-6362
[8]   Real-time measurement of small molecules directly in awake, ambulatory animals [J].
Arroyo-Curras, Netzahualcoyotl ;
Somerson, Jacob ;
Vieira, Philip A. ;
Ploense, Kyle L. ;
Kippin, Tod E. ;
Plaxco, Kevin W. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2017, 114 (04) :645-650
[9]   Diffuse Layer Effect on Electron-Transfer Kinetics Measured by Scanning Electrochemical Microscopy (SECM) [J].
Bae, Je Hyun ;
Yu, Yun ;
Mirkin, Michael V. .
JOURNAL OF PHYSICAL CHEMISTRY LETTERS, 2017, 8 (07) :1338-1342
[10]   Kinetic Evidence That the Solvent Barrier for Electron Transfer Is Absent in the Electric Double Layer [J].
Bangle, Rachel E. ;
Schneider, Jenny ;
Conroy, Daniel T. ;
Aramburu-Troselj, Bruno M. ;
Meyer, Gerald J. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2020, 142 (35) :14940-14946