Amentoflavone derivatives against SARS-CoV-2 main protease (MPRO): An in silico study

被引:2
作者
Hossain, Rajib [1 ]
Mahmud, Shafi [2 ]
Khalipha, Abul Bashar Ripon [1 ]
Saikat, Abu Saim Mohammad [3 ]
Dey, Dipta [4 ]
Khan, Rasel Ahmed [4 ]
Rauf, Abdur [5 ]
Wadood, Abdul [6 ]
Rafique, Humaria [6 ]
Bawazeer, Sami [7 ]
Khalil, Anees Ahmed [8 ]
Almarhoon, Zainab M. [9 ]
Mabkhot, Yahia N. [10 ]
Alzahrani, Khalid J. [11 ]
Islam, Muhammad Torequl [1 ]
Alsharif, Khalaf F. [12 ]
Khan, Haroon [13 ]
机构
[1] Bangabandhu Sheikh Mujibur Rahman Sci & Technol U, Fac Life Sci, Dept Pharm, Dhaka, Bangladesh
[2] Univ Rajshahi, Bioinformat Div, Microbiol Lab, Dept Genet Engn & Biotechnol, Rajshahi, Bangladesh
[3] Bangabandhu Sheikh Mujibur Rahman Sci & Technol U, Dept Biochem & Mol Biol, Dhaka, Bangladesh
[4] Khulna Univ, Sch Life Sci, Pharm Discipline, Khulna, Bangladesh
[5] Univ Swabi, Dept Chem, Anbar, Kpk, Pakistan
[6] Abdul Wali Khan Univ Mardan, Dept Biochem, Mardan, KP, Pakistan
[7] Umm Al Qura Univ, Dept Pharmacognosy, Fac Pharm, Mecca, Saudi Arabia
[8] Univ Lahore, Univ Inst Diet & Nutrit Sci, Fac Allied Hlth Sci, Lahore, Pakistan
[9] King Saud Univ, Coll Sci, Dept Chem, Riyadh, Saudi Arabia
[10] King Khalid Univ, Coll Pharm, Dept Pharmaceut Chem, Abha, Saudi Arabia
[11] Taif Univ, Coll Appl Med Sci, Dept Clin Labs Sci, Taif, Saudi Arabia
[12] Taif Univ, Coll Appl Med Sci, Dept Clin Lab, Taif, Saudi Arabia
[13] Abdul Wali Khan Univ Mardan, Dept Pharm, Mardan 23200, Pakistan
关键词
COVID-19; Derivatives of amentoflavone; M-PRO; Molecular docking; ADME; pKCSM; CORONAVIRUS; BIFLAVONOIDS; SARS; FLAVONOIDS; INHIBITORS; 3CL(PRO);
D O I
10.3233/MGC-220077
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Globally, novel coronavirus (nCoV19) outbreak is a great concern to humanity owing to the unavailability of effective medication or vaccine to date. Therefore, the development of drugs having anti-COVID-19 potential is a need of time. In this milieu, in-silico studies have proven to be rapid, inexpensive and effective as compared to other experimental studies. Evidently, natural products have shown significant potential in drug development to curtail different ailments, which have opened a new horizon in the screening of anti-COVID-19 agents. In this study, in-silico analysis were performed on derivatives of amentoflavone (4', 4'''-Dimethylamentoflavone, 4''', 7-Di-O-Methylamentoflavone, 4 '''''-methylamentoflavone, 4'-Monomethylamentoflavone, 7,4'-Dimethylamentoflavone, 7'-O-Methylamentoflavone, 7-O-methylamentoflavone, Heveaflavone, kayaflavone, and Sciadopitysin) and FDA approved anti-viral drug (camostatmesylate). All the derivatives of amentoflavone and FDA-approved anti-viral drugs were docked against SARS-CoV2 main protease (MPRO). The ten derivatives of amentoflavone showed strong interactions with the MPRO protein. In all cases, derivatives of amentoflavone showed good interaction with the targeted protein and better binding/docking score (-9.0351, -8.8566, -8.8509, -8.7746, -8.6192, -8.2537, -8.0876, -7.9501, -7.6429, and -7.6248 respectively) than FDA approved anti-viral drug. Therefore, derivatives of amentoflavone may be potent leads in drug discovery to combat HCoVs, such as SARS-CoV2. Moreover, to support the outcomes of this study further in-vivo investigations are required.
引用
收藏
页码:313 / 327
页数:15
相关论文
共 52 条
[1]   Anti-inflammatory activity of flavonoids from Chrozophora tinctoria [J].
Abdallah, Hossam M. ;
Almowallad, Fahad M. ;
Esmat, Ahmed ;
Shehata, Ibrahim A. ;
Abdel-Sattar, Essam A. .
PHYTOCHEMISTRY LETTERS, 2015, 13 :74-80
[2]   SwissADME and pkCSM Webservers Predictors: an integrated Online Platform for Accurate and Comprehensive Predictions for In Silico ADME/T Properties of Artemisinin and its Derivatives [J].
Al Azzam, Khaldun M. .
KOMPLEKSNOE ISPOLZOVANIE MINERALNOGO SYRA, 2023, (02) :14-21
[3]  
[Anonymous], 2008, REV FAC FARM
[4]   Redox-active biflavonoids from Garcinia brasiliensis as inhibitors of neutrophil oxidative burst and human erythrocyte membrane damage [J].
Arwa, Phanuel Saroni ;
Zeraik, Maria Luiza ;
Ximenes, Valdecir Farias ;
da Fonseca, Luiz Marcos ;
Bolzani, Vanderlan da Silva ;
Siqueira Silva, Dulce Helena .
JOURNAL OF ETHNOPHARMACOLOGY, 2015, 174 :410-418
[5]   Development of remdesivir repositioning as a nucleotide analog against COVID-19 RNA dependent RNA polymerase [J].
Babadaei, Mohammad Mahdi Nejadi ;
Hasan, Anwarul ;
Vahdani, Yasaman ;
Bloukh, Samir Haj ;
Sharifi, Majid ;
Kachooei, Ehsan ;
Haghighat, Setareh ;
Falahati, Mojtaba .
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2021, 39 (10) :3771-3779
[6]   An overview on applications of SwissADME web tool in the design and development of anticancer, antitubercular and antimicrobial agents: A medicinal chemist's perspective [J].
Bakchi, Bulti ;
Krishna, Ambati Dileep ;
Sreecharan, Ekambarapu ;
Ganesh, Veeramallu Bala Jaya ;
Niharika, Muraboina ;
Maharshi, Suryadevara ;
Puttagunta, Srinivasa Babu ;
Sigalapalli, Dilep Kumar ;
Bhandare, Richie R. ;
Shaik, Afzal B. .
JOURNAL OF MOLECULAR STRUCTURE, 2022, 1259
[7]   Potential Broad Spectrum Inhibitors of the Coronavirus 3CLpro: A Virtual Screening and Structure-Based Drug Design Study [J].
Berry, Michael ;
Fielding, Burtram C. ;
Gamieldien, Junaid .
VIRUSES-BASEL, 2015, 7 (12) :6642-6660
[8]  
Burley SK, 2017, METHODS MOL BIOL, V1606, P627, DOI 10.1007/978-1-4939-7000-1_26
[9]  
Ccgi M., 2016, Molecular Operating Environment (MOE), 2013.08, 354
[10]   Middle East Respiratory Syndrome Coronavirus: Another Zoonotic Betacoronavirus Causing SARS-Like Disease [J].
Chan, Jasper F. W. ;
Lau, Susanna K. P. ;
To, Kelvin K. W. ;
Cheng, Vincent C. C. ;
Woo, Patrick C. Y. ;
Yuen, Kwok-Yung .
CLINICAL MICROBIOLOGY REVIEWS, 2015, 28 (02) :465-522