Differentially expressed genes in Jojoba (Simmondsia chinensis) when subjected to water-stress

被引:2
|
作者
Al-Dossary, Othman [1 ,2 ]
Furtado, Agnelo [1 ]
Kharabianmasouleh, Ardashir [1 ]
Alsubaie, Bader [1 ,2 ]
Al-Mssallem, Ibrahim [2 ]
Henry, Robert J. [1 ,3 ]
机构
[1] Univ Queensland, Queensland Alliance Agr & Food Innovat, Brisbane 4072, Australia
[2] King Faisal Univ, Coll Agr & Food Sci, Al Hufuf 36362, Saudi Arabia
[3] Univ Queensland, ARC Ctr Excellence Plant Success Nat & Agr, Brisbane 4072, Australia
关键词
Water-stress; RNA-Seq; Differential gene expression; Jojoba; Simmondsia chinensis; Transcriptome; ZINC-FINGER PROTEIN; HIGH-QUALITY RNA; SALT STRESS; PLANT-GROWTH; DROUGHT TOLERANCE; TRANSCRIPTION FACTOR; ACC DEAMINASE; RESPONSES; ABA; IDENTIFICATION;
D O I
10.1016/j.cpb.2023.100311
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Jojoba (Simmondsia chinensis) is a desert shrub with an ability to survive in extremely arid environments. The exceptional drought tolerance of jojoba includes traits that could be useful in developing drought tolerant crop plants. This study characterized changes in gene expression in jojoba under water-stress during a controlledenvironment experiment. A large number of transcripts (10,936) were identified as differentially expressed under contrasting water stress conditions. These included transcripts corresponding to antioxidant activityrelated genes such as superoxide dismutase, defense response genes such as Pathogenesis-Related 4 (PR4), water molecule bio-channels such as aquaporins, cell membrane protectants such as Late Embryogenesis Abundant (LEA), and growth regulators such as 1-aminocyclopropane-1-carboxylic acid (ACC). A total of 880 novel transcripts were identified as representing possible novel genes associated with jojoba subjected to water stress. There were also many transcripts linked to transcriptional regulation that were expressed in response to water-stress in jojoba. Many male-specific transcripts corresponding to stress-related genes and transcription regulators were differentially expressed under water-stress with 1928 differentially expressed transcripts that aligned to the two Y chromosome-specific regions Y1 and Y2. The water-stress related genes detected may help explain the drought tolerance of jojoba and provide a valuable source of genes for exploitation in providing tolerance to water stress in other species.
引用
收藏
页数:15
相关论文
共 50 条
  • [21] Identification of differentially expressed genes in the medial prefrontal cortex of rats subjected to chronic unpredictable mild stress and treated with electroacupuncture
    Zhang, Yujiao
    Zhang, Haiyan
    Zheng, Xinjie
    Hou, Yi
    Chang, Xiaoli
    Zhang, Lili
    Wang, Ying
    Chen, Shaozong
    GENOMICS, 2024, 116 (05)
  • [22] SIMULATION OF POSSIBLE ADAPTIVE-MECHANISMS IN CROPS SUBJECTED TO WATER-STRESS
    JONES, JW
    ZUR, B
    IRRIGATION SCIENCE, 1984, 5 (04) : 251 - 264
  • [23] FLOWER BUD DORMANCY, ABA CONCENTRATION, AND SURVIVAL DURING FROST OF JOJOBA GENOTYPES UNDER WATER-STRESS
    BENZIONI, A
    PALZKILL, DA
    NELSON, JM
    JOURNAL OF THE AMERICAN SOCIETY FOR HORTICULTURAL SCIENCE, 1992, 117 (06) : 976 - 980
  • [24] PHOTOSYNTHETIC RESPONSES OF LEAVES TO WATER-STRESS, EXPRESSED BY PHOTOACOUSTICS AND RELATED METHODS .1. PROBING THE PHOTOACOUSTIC METHOD AS AN INDICATOR FOR WATER-STRESS INVIVO
    HAVAUX, M
    CANAANI, O
    MALKIN, S
    PLANT PHYSIOLOGY, 1986, 82 (03) : 827 - 833
  • [25] Evaluation of Differentially Expressed Genes in Leaves vs. Roots Subjected to Drought Stress in Flax (Linum usitatissimum L.)
    Wang, Ningning
    Qi, Fan
    Wang, Fu
    Lin, Yujie
    Xiaoyang, Chunxiao
    Peng, Zhanwu
    Zhang, Bi
    Qi, Xin
    Deyholos, Michael K.
    Zhang, Jian
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2023, 24 (15)
  • [26] Identification of differentially expressed genes under drought stress in perennial ryegrass
    Liu, Shuwei
    Jiang, Yiwei
    PHYSIOLOGIA PLANTARUM, 2010, 139 (04) : 375 - 387
  • [27] Identification of differentially expressed genes of Haloxylon ammodendron in response to salinity stress
    He, J. F.
    Fang, Y. Y.
    Lu, Z. X.
    Wang, L. W.
    Zhao, X. Q.
    Fu, X. F.
    Zhao, J.
    Liu, H. K.
    BIOLOGIA PLANTARUM, 2019, 63 : 610 - 617
  • [28] Genes differentially expressed in broccoli as an early and late response to wounding stress
    Torres-Contreras, Ana M.
    Senes-Guerrero, Carolina
    Pacheco, Adriana
    Gonzalez-Aguero, Mauricio
    Ramos-Parra, Perla A.
    Cisneros-Zevallos, Luis
    Jacobo-Velazquez, Daniel A.
    POSTHARVEST BIOLOGY AND TECHNOLOGY, 2018, 145 : 172 - 182
  • [29] Identification of differentially expressed genes in hypothalamus of chicken during cold stress
    Chen, X. Y.
    Li, R.
    Wang, M.
    Geng, Z. Y.
    MOLECULAR BIOLOGY REPORTS, 2014, 41 (04) : 2243 - 2248
  • [30] Identification of differentially expressed genes in hypothalamus of chicken during cold stress
    X. Y. Chen
    R. Li
    M. Wang
    Z. Y. Geng
    Molecular Biology Reports, 2014, 41 : 2243 - 2248