The EGR3 regulome of infant KMT2A-r acute lymphoblastic leukemia identifies differential expression of B-lineage genes predictive for outcome

被引:3
作者
Kuelp, Marius [1 ,2 ]
Larghero, Patrizia [1 ]
Alten, Julia [3 ]
Cario, Gunnar [3 ]
Eckert, Cornelia [4 ]
Caye-Eude, Aurelie [5 ,6 ]
Cave, Helene [5 ,6 ]
Schmachtel, Tessa [2 ]
Bardini, Michela [7 ]
Cazzaniga, Giovanni [7 ,8 ]
De Lorenzo, Paola [9 ]
Valsecchi, Maria Grazia [10 ]
Bonig, Halvard [11 ,12 ,13 ]
Meyer, Claus [1 ]
Rieger, Michael A. [2 ,14 ,15 ]
Marschalek, Rolf [1 ]
机构
[1] Goethe Univ, Inst Pharmaceut Biol, Diagnost Ctr Acute Leukemia DCAL, Frankfurt Am Main, Germany
[2] Goethe Univ Hosp Frankfurt, Dept Med Hematol Oncol, Frankfurt Am Main, Germany
[3] Univ Med Ctr Schleswig Holstein, Dept Pediat, Campus Kiel, Lubeck, Germany
[4] Charite Univ Med Berlin, Dept Pediat Hematol & Oncol, Berlin, Germany
[5] Hop Robert Debre, AP HP, Genet Dept, F-75019 Paris, France
[6] Univ Paris Cite, Inst Rech St Louis, Inserm U1131, F-75010 Paris, France
[7] Univ Milano Bicocca, San Gerardo Hosp, Fdn Monza & Brianza Bambino MBBM, Ctr Ric Tettamanti,Pediat, Monza, Italy
[8] Univ Milano Bicocca, Sch Med & Surg, Genet, Monza, Italy
[9] Univ Milano Bicocca, Pediat Clin, Stat Sect, Monza, Italy
[10] Univ Milano Bicocca, Ctr Bioinformat Biostat & Bioimaging, Monza, Italy
[11] Goethe Univ, Inst Transfus Med & Immunohematol, Frankfurt Am Main, Germany
[12] German Red Cross Blood Serv Baden Wurttemberg Hess, Frankfurt Am Main, Germany
[13] Univ Washington, Dept Med, Div Hematol, Sch Med, Seattle, WA USA
[14] German Canc Consortium, DKTK & German Canc Res Ctr DKZF, Heidelberg, Germany
[15] Cardio Pulm Inst, Frankfurt Am Main, Germany
关键词
TRANSCRIPTION FACTOR; CELL IDENTITY; RESPONSE GENES; A EGR-1; PAX5; PROLIFERATION; INFLAMMATION; COREPRESSOR; INTEGRATION; DISRUPTION;
D O I
10.1038/s41375-023-01895-z
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
KMT2A-rearranged acute lymphoblastic infant leukemia (KMT2A-r iALL) is associated with outsize risk of relapse and relapse mortality. We previously reported strong upregulation of the immediate early gene EGR3 in KMT2A::AFF1 iALL at relapse; now we provide analyses of the EGR3 regulome, which we assessed through binding and expression target analysis of an EGR3-overexpressing t(4;11) cell culture model. Our data identify EGR3 as a regulator of early B-lineage commitment. Principal component analysis of 50 KMT2A-r iALL patients at diagnosis and 18 at relapse provided strictly dichotomous separation of patients based on the expression of four B-lineage genes. Absence of B-lineage gene expression translates to more than two-fold poorer long-term event-free survival. In conclusion, our study presents four B-lineage genes with prognostic significance, suitable for gene expression-based risk stratification of KMT2A-r iALL patients.
引用
收藏
页码:1216 / 1233
页数:18
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