Genome-wide SNPs reveal clonality and population genetic structure of Nymphoides peltata in Japan (Menyanthaceae)

被引：1
|
作者：
Asakawa, Akira [1 ]
Murakami, Shoki [1 ]
Horie, Sachiko [2 ]
Matsuo, Ayumi [3 ]
Suyama, Yoshihisa [3 ]
Fujii, Shinji [4 ]
Maki, Masayuki [1 ,2 ]
机构：
[1] Tohoku Univ, Grad Sch Life Sci, Sendai 9800862, Japan
[2] Tohoku Univ, Bot Gardens, Sendai 9800862, Japan
[3] Tohoku Univ, Grad Sch Agr Sci, Kawatabi Field Sci Ctr, Osaki 9896711, Japan
[4] Univ Human Environm, Dept Environm Sci, Okazaki 4443505, Japan
来源：
AQUATIC BOTANY | 2024年 / 190卷
关键词：
Anthropochory; Clone identification; Genetic differentiation; Nymphoides peltata; SNPs; POTAMOGETON-PECTINATUS; REPRODUCTION; DIVERSITY; CONSEQUENCES; PLANTS; WATER;
D O I：
10.1016/j.aquabot.2023.103720
中图分类号：
Q94 [植物学];
学科分类号：
071001 ;
摘要：
The clonal diversity of Nymphoides peltata in Japan was estimated using genome-wide SNPs. In total, 27 clones were detected by considering the genetic distances between clones. The number of clones was much smaller than the estimate of 61 from a previous study that used SSR (Short Sequence Repeats) markers. This may be because population have diminished due to environmental deterioration over the past decade, fewer samples were analyzed in this study, or there were technical problems with the SSR markers used in the previous study. The populations of N. peltata were genetically differentiated between the western and eastern regions of the Japanese archipelago. Artificial movements may have occurred in a few populations.
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页数：5
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