Identification of cuproptosis-related lncRNA for predicting prognosis and immunotherapeutic response in cervical cancer

被引:8
作者
Kong, Xiaoyu [1 ]
Xiong, Yuanpeng [2 ]
Xue, Mei [3 ]
He, Jie [4 ]
Lu, Qinsheng [5 ]
Chen, Miaojuan [5 ]
Li, Liping [4 ]
机构
[1] Nanchang Univ, Sch Publ Hlth, Nanchang 330006, Jiangxi, Peoples R China
[2] Nanchang Univ, Dept Gen Surg, Affiliated Hosp 1, Nanchang 330006, Peoples R China
[3] Jiangxi Agr Univ, Sch Biosci & Bioengn, Nanchang 330045, Jiangxi, Peoples R China
[4] First Hosp Nanchang, Dept Clin Lab, Nanchang 330008, Jiangxi, Peoples R China
[5] Guangzhou Med Univ, Guangzhou Inst Pediat, Guangzhou Women & Childrens Med Ctr, Guangzhou 510632, Guangdong, Peoples R China
基金
中国国家自然科学基金;
关键词
COPPER UPTAKE; CELL-DEATH; RNA; CHEMOTHERAPY; PROGRESSION; MORTALITY; GENE; KEGG;
D O I
10.1038/s41598-023-37898-0
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Patients diagnosed with advanced cervical cancer (CC) have poor prognosis after primary treatment, and there is a lack of biomarkers for predicting patients with an increased risk of recurrence of CC. Cuproptosis is reported to play a role in tumorigenesis and progression. However, the clinical impacts of cuproptosis-related lncRNAs (CRLs) in CC remain largely unclear. Our study attempted to identify new potential biomarkers to predict prognosis and response to immunotherapy with the aim of improving this situation. The transcriptome data, MAF files, and clinical information for CC cases were obtained from the cancer genome atlas, and Pearson correlation analysis was utilized to identify CRLs. In total, 304 eligible patients with CC were randomly assigned to training and test groups. LASSO regression and multivariate Cox regression were performed to construct a cervical cancer prognostic signature based on cuproptosis-related lncRNAs. Afterwards, we generated Kaplan-Meier curves, receiver operating characteristic curves and nomograms to verify the ability to predict prognosis of patients with CC. Genes for assessing differential expression among risk subgroups were also evaluated by functional enrichment analysis. Immune cell infiltration and the tumour mutation burden were analysed to explore the underlying mechanisms of the signature. Furthermore, the potential value of the prognostic signature to predict response to immunotherapy and sensitivity to chemotherapy drugs was examined. In our study, a risk signature containing eight cuproptosis-related lncRNAs (AL441992.1, SOX21-AS1, AC011468.3, AC012306.2, FZD4-DT, AP001922.5, RUSC1-AS1, AP001453.2) to predict the survival outcome of CC patients was developed, and the reliability of the risk signature was appraised. Cox regression analyses indicated that the comprehensive risk score is an independent prognostic factor. Moreover, significant differences were found in progression-free survival, immune cell infiltration, therapeutic response to immune checkpoint inhibitors, and IC50 for chemotherapeutic agents between risk subgroups, suggesting that our model can be well employed to assess the clinical efficacy of immunotherapy and chemotherapy. Based on our 8-CRLs risk signature, we were able to independently assess the outcome and response to immunotherapy of CC patients, and this signature might benefit clinical decision-making for individualized treatment.
引用
收藏
页数:18
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