Vibrio sinus sp. nov., a marine bacterium isolated from coastal seawater

被引:0
|
作者
Wang, Wei [1 ]
Zhao, Wenbin [2 ]
Cao, Bingbing [1 ]
Liu, Ronghua [2 ]
Cheng, Haojin [2 ]
Tian, Peng [1 ]
Xiao, Jiaguang [1 ]
Xu, Ziqing [1 ]
Wang, Xiaolei [2 ]
Niu, Wentao [1 ]
机构
[1] Minist Nat Resources, Inst Oceanog 3, Lab Marine Biol & Ecol, 178 Daxue Rd, Xiamen 361005, Peoples R China
[2] Ocean Univ China, Coll Marine Life Sci, Qingdao 266003, Peoples R China
基金
中国国家自然科学基金;
关键词
Dongshan Bay; surface seawater; Vibrio sinus sp; nov; DATABASE; PERFORMANCE; MARISFLAVI; QUALITY; TOOL;
D O I
10.1099/ijsem.0.005676
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-straining-negative, facultatively anaerobic, motile by means of a polar flagellum and rod-shaped marine bacterium, designated S4M6T, was isolated from surface seawater collected in Dongshan Bay (Fujian, PR China). Phylogenetic analysis based on 16S rRNA genes, phylogenomic analysis of single -copy gene families and whole genome data indicated that S4M6T represented a member of the genus Vibrio. The closest phylogenetic relatives of S4M6T were Vibrio marisflavi CGMCC 1.8994T (97.8 % 16S rRNA gene sequence pairwise similarity), Vibrio variabilis LMG 25438T (96.9 %), Vibrio gangliei SZDIS-1T (96.2 %) and Vibrio aestivus M22T (96.1 %). The growth of S4M6T occurred at 15-35 degrees C (optimum 28 degrees C), pH 4.0-9.0 (optimum 5.0-7.0) and in the presence of 2-5 % (w/v) NaCl (optimum 3 %). The predominant fatty acids (>10 %) are C16:0, summed feature 3 (C16:1w7c and/or C16:1w6c) and summed feature 8 (C18:1w7c and/or C18:1w6c). The DNA G+C content of the assembled genomic sequences was 43.4 % for S4M6T. Average nucleotide identity (ANI) values between S4M6T and the reference species were lower than the threshold for species delineation (95-96 %); in silico DNA-DNA hybridization further indicated that S4M6T had less than 70 % similarity to its relatives. On the basis of the polyphasic evidence, strain S4M6T is proposed to represent a novel species of the genus Vibrio, for which the name Vibrio sinus sp. nov. is proposed. The type strain is S4M6T (= KCTC 92312T= MCCC 1K06167T).
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页数:8
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