Single-cell transcriptomics reveals cell type diversity of human prostate

被引:0
作者
Yang Chen [1 ,2 ]
Peng Zhang [3 ]
Jinling Liao [1 ]
Jiwen Cheng [1 ,2 ]
Qin Zhang [4 ]
Tianyu Li [1 ,2 ]
Haiying Zhang [1 ]
Yonghua Jiang [1 ]
Fangxing Zhang [1 ,2 ]
Yanyu Zeng [1 ]
Linjian Mo [1 ,2 ]
Haibiao Yan [2 ]
Deyun Liu [2 ]
Qinyun Zhang [1 ]
Chunlin Zou [5 ]
GongHong Wei [3 ,4 ]
Zengnan Mo [1 ,2 ]
机构
[1] Center for Genomic and Personalized Medicine,Guangxi Key Laboratory for Genomic and Personalized Medicine,Guangxi Collaborative Innovation Center for Genomic and Personalized Medicine,Guangxi Medical University
[2] Department of Urology,The First Affiliated Hospital of Guangxi Medical University
[3] Key Laboratory of Metabolism and Molecular Medicine of the Ministry of Education&Department of Biochemistry and Molecular Biology,School of Basic Medical Sciences,Fudan University Shanghai Cancer Center,Fudan University
[4] Biocenter Oulu,Faculty of Biochemistry and Molecular Medicine,University of Oulu
[5] Key Laboratory of Longevity and Ageing-Related Disease of Chinese Ministry of Education,Center for Translational Medicine and School of Preclinical Medicine,Guangxi Medical University
关键词
D O I
暂无
中图分类号
R737.25 [前列腺肿瘤];
学科分类号
100214 ;
摘要
Extensive studies have been performed to describe the phenotypic changes occurring during malignant transformation of the prostate. However, the cell types and associated changes that contribute to the development of prostate diseases and cancer remain elusive, largely due to the heterogeneous composition of prostatic tissues. Here, we conduct a comprehensive evaluation of four human prostate tissues by singlecell RNA sequencing(sc RNA-seq) to analyze their cellular compositions. We identify 18 clusters of cell types,each with distinct gene expression profiles and unique features; of these, one cluster of epithelial cells(Ep) is found to be associated with immune function. In addition, we characterize a special cluster of fibroblasts and aberrant signaling changes associated with prostate cancer(PCa). Moreover, we provide insights into the epithelial changes that occur during the cellular senescence and aging. These results expand our understanding of the unique functional associations between the diverse prostatic cell types and the contributions of specific cell clusters to the malignant transformation of prostate tissues and PCa development.
引用
收藏
页码:1002 / 1015
页数:14
相关论文
共 66 条
[1]  
Global Cancer Statistics 2020: GLOBOCAN Estimates of Incidence and Mortality Worldwide for 36 Cancers in 185 Countries[J] . Sung Hyuna,Ferlay Jacques,Siegel Rebecca L.,Laversanne Mathieu,Soerjomataram Isabelle,Jemal Ahmedin,Bray Freddie.CA: A Cancer Journal for Clinicians . 2021 (3)
[2]   Single-cell analysis reveals transcriptomic remodellings in distinct cell types that contribute to human prostate cancer progression [J].
Chen, Sujun ;
Zhu, Guanghui ;
Yang, Yue ;
Wang, Fubo ;
Xiao, Yu-Tian ;
Zhang, Na ;
Bian, Xiaojie ;
Zhu, Yasheng ;
Yu, Yongwei ;
Liu, Fei ;
Dong, Keqin ;
Mariscal, Javier ;
Liu, Yin ;
Soares, Fraser ;
Loo Yau, Helen ;
Zhang, Bo ;
Chen, Weidong ;
Wang, Chao ;
Chen, Dai ;
Guo, Qinghua ;
Yi, Zhengfang ;
Liu, Mingyao ;
Fraser, Michael ;
De Carvalho, Daniel D. ;
Boutros, Paul C. ;
Di Vizio, Dolores ;
Jiang, Zhou ;
van der Kwast, Theodorus ;
Berlin, Alejandro ;
Wu, Song ;
Wang, Jianhua ;
He, Housheng Hansen ;
Ren, Shancheng .
NATURE CELL BIOLOGY, 2021, 23 (01) :87-98
[3]   Identification of a distinct luminal subgroup diagnosing and stratifying early stage prostate cancer by tissue-based single-cell RNA sequencing [J].
Ma, Xiaoshi ;
Guo, Jinan ;
Liu, Kaisheng ;
Chen, Lipeng ;
Liu, Dale ;
Dong, Shaowei ;
Xia, Jinquan ;
Long, Qiaoyun ;
Yue, Yongjian ;
Zhao, Pan ;
Hu, Fengyan ;
Xiao, Zhangang ;
Pan, Xinghua ;
Xiao, Kefeng ;
Cheng, Zhiqiang ;
Ke, Zunfu ;
Chen, Zhe-Sheng ;
Zou, Chang .
MOLECULAR CANCER, 2020, 19 (01)
[4]   Single-cell transcriptomics identifies a distinct luminal progenitor cell type in distal prostate invagination tips [J].
Guo, Wangxin ;
Li, Lin ;
He, Juan ;
Liu, Zhuang ;
Han, Ming ;
Li, Fei ;
Xia, Xinyi ;
Zhang, Xiaoyu ;
Zhu, Yao ;
Wei, Yu ;
Li, Yunguang ;
Aji, Rebiguli ;
Dai, Hao ;
Wei, Hui ;
Li, Chunfeng ;
Chen, Yu ;
Chen, Luonan ;
Gao, Dong .
NATURE GENETICS, 2020, 52 (09) :908-+
[5]   The Genes-Candidates for Prognostic Markers of Metastasis by Expression Level in Clear Cell Renal Cell Cancer [J].
Apanovich, Natalya ;
Peters, Maria ;
Apanovich, Pavel ;
Mansorunov, Danzan ;
Markova, Anna ;
Matveev, Vsevolod ;
Karpukhin, Alexander .
DIAGNOSTICS, 2020, 10 (01)
[6]   Expansion of Luminal Progenitor Cells in the Aging Mouse and Human Prostate [J].
Crowell, Preston D. ;
Fox, Jonathan J. ;
Hashimoto, Takao ;
Diaz, Johnny A. ;
Navarro, Hector I. ;
Henry, Gervaise H. ;
Feldmar, Blake A. ;
Lowe, Matthew G. ;
Garcia, Alejandro J. ;
Wu, Ye E. ;
Sajed, Dipti P. ;
Strand, Douglas W. ;
Goldstein, Andrew S. .
CELL REPORTS, 2019, 28 (06) :1499-+
[7]  
MIF family proteins in genitourinary cancer: tumorigenic roles and therapeutic potential[J] . Penticuff Justin C,Woolbright Benjamin L,Sielecki Thais M,Weir Scott J,Taylor John A.Nature reviews. Urology . 2019 (5)
[8]   Analysis of Differential Expression of microRNAs and Their Target Genes in Prostate Cancer: A Bioinformatics Study on Microarray Gene Expression Data [J].
Khorasani, Maryam ;
Shahbazi, Shirin ;
Hosseinkhan, Nazanin ;
Mahdian, Reza .
INTERNATIONAL JOURNAL OF MOLECULAR AND CELLULAR MEDICINE, 2019, 8 (02)
[9]   A Cellular Anatomy of the Normal Adult Human Prostate and Prostatic Urethra [J].
Henry, Gervaise H. ;
Malewska, Alicia ;
Joseph, Diya B. ;
Malladi, Venkat S. ;
Lee, Jeon ;
Torrealba, Jose ;
Mauck, Ryan J. ;
Gahan, Jeffrey C. ;
Raj, Ganesh V. ;
Roehrborn, Claus G. ;
Hon, Gary C. ;
MacConmara, Malcolm P. ;
Reese, Jeffrey C. ;
Hutchinson, Ryan C. ;
Vezina, Chad M. ;
Strand, Douglas W. .
CELL REPORTS, 2018, 25 (12) :3530-+
[10]   Limb-bud and Heart Overexpression Inhibits the Proliferation and Migration of PC3M Cells [J].
Liu, Qicai ;
Li, Ermao ;
Huang, Long ;
Cheng, Minsheng ;
Li, Li .
JOURNAL OF CANCER, 2018, 9 (02) :424-432