国外栽培豌豆遗传多样性分析及核心种质构建

被引:31
作者
宗绪晓 [1 ]
关建平 [2 ]
王述民 [2 ]
刘庆昌 [1 ]
Robert R Redden [3 ]
Rebecca Ford [4 ]
机构
[1] 中国农业大学农学与生物技术学院
[2] 中国农业科学院作物科学研究所/国家农作物基因资源与基因改良重大科学工程
[3] Australian Temperate Field Crops Collection,Grains Innovation Park,The Department of Primary Industries,Private Bag , Horsham,Victoria,Australia
[4] BioMarka,Faculty of Land and Food Resources,The University of Melbourne,Victoria,Australia
关键词
豌豆栽培种(Pisum sativum L.); SSR; 遗传多样性; 核心种质; 国外资源;
D O I
暂无
中图分类号
S643.3 [豌豆];
学科分类号
090202 ;
摘要
从111对备选SSR引物中筛选出能扩增出清晰稳定单一带的多态性引物21对及其最佳退火温度,并优化了豌豆SSR标记实验体系。利用上述引物,对来自于67个国家的731份豌豆栽培种质(Pisum sativum L.)进行遗传多样性分析与核心种质构建。共扩增出109条多态性带,每对引物平均扩增出5.19个等位变异。SSR等位变异在各大洲间分布不均匀,有效等位变异数、Shannon's信息指数(I)洲际间差异明显。各大洲资源群间遗传多样性差异显著,其中亚洲最高(I=1.1753),欧洲其次(I=1.1387),俄罗斯联邦(I=1.0285)、美洲(I=1.0196)、非洲(I=0.9254)、大洋洲(I=0.8608)依次降低。利用Popgene1.32软件,依豌豆栽培资源洲际间Nei78遗传距离可聚类成2个组群和4个亚组群;基于Structure 2.2软件分析,国外栽培豌豆资源实际由3大类群组成,并与Popgene 1.32聚类结果呼应得较好。上述两种分析方法均表明,国外栽培豌豆类群的遗传多样性与其地理分布相关。设计并实践了一套基于Structure分析的科学可靠、逻辑性强的核心种质构建标准化方案,并依此构建了一套以6.57%的资源(48份)涵盖总体84.4%等位变异的国外栽培豌豆核心种质。
引用
收藏
页码:1518 / 1528
页数:11
相关论文
共 14 条
[1]  
Microsatellite marker polymorphism and mapping in pea ( Pisum sativum L.)[J] . K. Loridon,K. McPhee,J. Morin,P. Dubreuil,M. L. Pilet-Nayel,G. Aubert,C. Rameau,A. Baranger,C. Coyne,I. Lejeune-Hènaut,J. Burstin.Theoretical and Applied Genetics . 2005 (6)
[2]   Genetic diversity within Pisum sativum using protein- and PCR-based markers [J].
Baranger, A ;
Aubert, G ;
Arnau, G ;
Lainé, AL ;
Deniot, G ;
Potier, J ;
Weinachter, C ;
Lejeune-Hénaut, I ;
Lallemand, J ;
Burstin, J .
THEORETICAL AND APPLIED GENETICS, 2004, 108 (07) :1309-1321
[3]   Using molecular markers to assess the effect of introgression on quantitative attributes of common bean in the Andean gene pool [J].
Islam, FMA ;
Beebe, S ;
Muñoz, M ;
Tohme, J ;
Redden, RJ ;
Basford, KE .
THEORETICAL AND APPLIED GENETICS, 2004, 108 (02) :243-252
[4]   Diversity analysis and genotyping in Pisum with sequence tagged microsatellite site (STMS) primers [J].
Ford, R ;
Le Roux, K ;
Itman, C ;
Brouwer, JB ;
Taylor, PWJ .
EUPHYTICA, 2002, 124 (03) :397-405
[5]  
Allozyme diversity of cultivated cowpea Vigna unguiculata (L.) Walp[J] . R. S. Pasquet.TAG Theoretical and Applied Genetics . 2000 (1-2)
[6]  
Utilization of isozyme polymorphism for cultivar identification of 45 commercial peas ( Pisum sativum L.)[J] . Euphytica . 2000 (3)
[7]  
Monophyletic vs. polyphyletic origin of the crops on which agriculture was founded in the Near East[J] . Daniel Zohary.Genetic Resources and Crop Evolution . 1999 (2)
[8]   Polymorphism of insertion sites of Ty1-copia class retrotransposons and its use for linkage and diversity analysis in pea [J].
Ellis, THN ;
Poyser, SJ ;
Knox, MR ;
Vershinin, AV ;
Ambrose, MJ .
MOLECULAR AND GENERAL GENETICS, 1998, 260 (01) :9-19
[9]   Comparative analysis of genetic diversity in pea assessed by RFLP- and PCR-based methods [J].
Lu, J ;
Knox, MR ;
Ambrose, MJ ;
Brown, JKM ;
Ellis, THN .
THEORETICAL AND APPLIED GENETICS, 1996, 93 (07) :1103-1111
[10]  
A phylogenetic analysis of Pisum based on morphological characters, and allozyme and RAPD markers[J] . B. K. Hoey,K. R. Crowe,V. M. Jones,N. O. Polans.Theoretical and Applied Genetics . 1996 (1)