Global Evolution and Transmission Dynamics of Enterovirus D68

被引:0
作者
Xiao, Mengyi [1 ,2 ,3 ]
Han, Zhenzhi [4 ]
Ma, Xiaozhen [5 ]
Ji, Tianjiao [2 ,3 ]
Yan, Dongmei [2 ,3 ]
Wang, Dongyan [2 ,3 ]
Zhu, Shuangli [2 ,3 ]
Lu, Huanhuan [2 ,3 ,6 ]
Cong, Ruyi [1 ,2 ,3 ,7 ]
Wang, Xiaoyi [2 ,3 ,8 ]
Yang, Tingting [2 ,3 ,9 ]
Liu, Ying [2 ,3 ]
Zhou, Lei [2 ,3 ]
Li, Fan [2 ,3 ,10 ]
Liang, Yucai [2 ,3 ,11 ]
Zhao, Linqing [4 ]
Fan, Hua [1 ]
Zhang, Yong [2 ,3 ]
Xiao, Jinbo [2 ,3 ]
机构
[1] Shandong First Med Univ & Shandong Acad Med Sci, Sch Publ Hlth, Jinan, Peoples R China
[2] Chinese Ctr Dis Control & Prevent, Natl Inst Viral Dis Control & Prevent, Natl Key Lab Intelligent Tracking & Forecasting In, Beijing, Peoples R China
[3] Chinese Ctr Dis Control & Prevent, Natl Lab Poliomyelitis,Key Lab Biosafety, WHO WPRO Reg Polio Reference Lab,Key Lab Microbial, Natl Inst Viral Dis Control & Prevent,Natl Hlth Co, Beijing, Peoples R China
[4] Capital Inst Pediat, Lab Virol, Beijing Key Lab Etiol Viral Dis Children, Beijing, Peoples R China
[5] Sichuan Ctr Dis Control & Prevent, Chengdu, Peoples R China
[6] Chinese PLA Ctr Dis Control & Prevent, Beijing, Peoples R China
[7] North China Univ Sci & Technol, Sch Publ Hlth, Tangshan, Peoples R China
[8] Anhui Univ Sci & Technol, Med Sch, Huainan, Peoples R China
[9] Jinan Ctr Dis Control & Prevent, Jinan, Peoples R China
[10] Shenyang Med Coll, Shenyang, Peoples R China
[11] Shandong Second Med Univ, Dept Med Microbiol, Weifang, Peoples R China
关键词
Enterovirus D68; evolutionary analysis; phylogenetic analysis; phylogeography analysis; transmission; RESPIRATORY ILLNESS; MOLECULAR EVOLUTION; EMERGENCE; SEQUENCE; OUTBREAK; SEROTYPE; EUROPE;
D O I
10.1002/jmv.70497
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Enterovirus D68 (EV-D68), a serotype of the enterovirus species D, has garnered significant attention due to outbreaks reported in 2014, 2016, and 2018. In this study, 36 Chinese EV-D68 strains were isolated, sequenced, and combined with all EV-D68 VP1 sequences from GenBank to form a data set of 1679 sequences. This data set served as the basis for phylogenetic, evolutionary dynamics, phylogeographic, and key amino acid site mutation analyses of EV-D68. Based on the VP1 region, EV-D68 is classified into four genotypes (A-D), and seven subgenotypes (B1-B3, D1-D4), with B3 and D3 being the predominant subgenotypes. Bayesian skyline plots indicated that genotypes B and D experienced multiple population expansions, aligning with reported EV-D68 outbreaks. Phylogeographic analyses of the B3 subgenotypes revealed sequences from Europe and North America clustering into a single evolutionary branch, suggesting significant transmission between these regions. Additionally, mutation analysis identified VP1-98 as a high-frequency mutation site, differing significantly between the previously prevalent A and C genotypes and the currently prevalent B and D genotypes. However, the functional implications of this mutation require further investigation. This study provides a solid theoretical basis for epidemiological research, disease surveillance, and prevention efforts related to EV-D68.
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页数:13
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