Genome-wide identification, characterization, and functional analysis of the myb transcription factor family in chickpea (Cicer arietinum)

被引:0
作者
Afzal, Muhammad [1 ]
Nawaz, Hira [2 ]
Hanif, Sadia [3 ]
Rahman, Muhammad Habib Ur [4 ]
Ghazy, Abdel-Halim [1 ]
机构
[1] King Saud Univ, Coll Food & Agr Sci, Dept Plant Prod, Riyadh 11451, Saudi Arabia
[2] Cukurova Univ, Fac Agr, Dept Hort, Adana, Turkiye
[3] Natl Univ Sci & Technol, USPCAS E, Islamabad 44000, Pakistan
[4] Georg August Univ Gottingen, Dept Crop Sci, Trop Plant Prod & Agr Syst Modelling TROPAGS, Gottingen, Germany
关键词
Chickpea; Abiotic stress; MYB; TF; Genome-wide analysis; FACTOR GENES; EXPRESSION; TOLERANCE;
D O I
10.1007/s10722-025-02563-0
中图分类号
S3 [农学(农艺学)];
学科分类号
0901 ;
摘要
Chickpea, a globally important legume crop, has been extensively studied for its MYB transcription factors (TFs), which play crucial roles in plant growth, development, and stress response. In this study, we conducted a genome-wide analysis of 113 CaMYB-TFs, examining chemical properties, conserved domains, phylogenetic relationships, gene structures, chromosomal distribution, and synteny with Arabidopsis thaliana and Medicago truncatula. The CaMYB-TFs displayed considerable diversity in sequence characteristics and were unevenly distributed across the chickpea genome, with several genes remaining unplaced. The CaMYB-TFs displayed considerable diversity in sequence characteristics and were unevenly distributed across the chickpea genome, with several genes remaining unplaced. Conserved domain analysis revealed six major MYB-related domains, and phylogenetic clustering grouped the genes into nine distinct clades. Synteny and protein-protein interaction analyses indicated evolutionary conservation and functional relevance under abiotic stress. This comprehensive study enhances our understanding of the MYB gene family in chickpea and provides a solid foundation for future functional and evolutionary research.
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页数:20
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