Multimodal omics analysis of the EGFR signaling pathway in non-small cell lung cancer and emerging therapeutic strategies

被引:0
作者
Li, Yuzheng [1 ,2 ,3 ]
Yu, Lili [1 ,2 ]
Zhou, Shiyao [1 ,2 ]
Zhou, Hua [3 ,4 ]
Wu, Qibiao [1 ,2 ,3 ]
机构
[1] Macau Univ Sci & Technol, Fac Chinese Med, State Key Lab Qual Res Chinese Med, Macau 999078, Peoples R China
[2] Macau Univ Sci & Technol, Univ Hosp, Macau 999078, Peoples R China
[3] Guangdong Macao Indepth Cooperat Zone Hengqin, Chinese Med Guangdong Lab, Hengqin Lab, Zhuhai 519000, Peoples R China
[4] Guangzhou Univ Chinese Med, Guangdong Prov Hosp Chinese Med, Guangdong Prov Acad Chinese Med Sci, State Key Lab Tradit Chinese Med Syndrome,Affiliat, Guangzhou 510006, Peoples R China
关键词
Cancer therapy; Epidermal growth factor receptor (EGFR); Multiomics technologies; Non-small cell lung cancer (NSCLC); Targeted therapies; GROWTH-FACTOR RECEPTOR; MUTATED NSCLC; RESISTANCE; MYC; INACTIVATION; PROGRESSION; SAVOLITINIB; METABOLISM; INHIBITORS; EXPRESSION;
D O I
10.32604/or.2025.059311
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Background: Non-small cell lung cancer (NSCLC) involves complex alterations in the epidermal growth factor receptor (EGFR) signaling pathway. This study aims to integrate multimodal omics analyses to evaluate and enhance EGFRtargeted therapies. Methods: We reviewed and synthesized omics data-including genomics, transcriptomics, proteomics, epigenomics, and metabolomics data-related to the EGFR pathway in NSCLC, examined the clinical outcomes of current therapies and proposed new treatment strategies. Results: Integrated omics analyses revealed the multifaceted role of EGFR in NSCLC. Transcriptomic analysis revealed gene expression alterations due to EGFR mutations, with upregulation of oncogenes and downregulation of tumor suppressors. Proteomics revealed complex interactions within the EGFR network, revealing cross-talk with other receptors. Epigenomics highlighted the impact of DNA methylation and histone modifications on EGFR and its downstream genes, whereas metabolomics demonstrated shifts in metabolic patterns essential for tumor growth. Conclusion: This study highlights the critical role of multimodal omics in understanding the molecular landscape of NSCLC, offering insights into more effective, personalized therapies. Future advancements in omic technologies and analysis are expected to significantly enhance NSCLC diagnosis and treatment.
引用
收藏
页码:1363 / 1376
页数:14
相关论文
共 80 条
[1]  
[Anonymous], 2023, World Health Organization
[2]   Rebiopsy of Lung Cancer Patients with Acquired Resistance to EGFR Inhibitors and Enhanced Detection of the T790M Mutation Using a Locked Nucleic Acid-Based Assay [J].
Arcila, Maria E. ;
Oxnard, Geoffrey R. ;
Nafa, Khedoudja ;
Riely, Gregory J. ;
Solomon, Stephen B. ;
Zakowski, Maureen F. ;
Kris, Mark G. ;
Pao, William ;
Miller, Vincent A. ;
Ladanyi, Marc .
CLINICAL CANCER RESEARCH, 2011, 17 (05) :1169-1180
[3]   Cerebrospinal fluid circulating tumour DNA genotyping and survival analysis in lung adenocarcinoma with leptomeningeal metastases [J].
Bai, Kaixuan ;
Chen, Xin ;
Qi, Xuejiao ;
Zhang, Yu ;
Zou, Yueli ;
Li, Jian ;
Yu, Lili ;
Li, Yuanyuan ;
Jiang, Jiajia ;
Yang, Yi ;
Liu, Yajing ;
Feng, Shuanghao ;
Bu, Hui .
JOURNAL OF NEURO-ONCOLOGY, 2023, 165 (1) :149-160
[4]   Metformin Enhances TKI-Afatinib Cytotoxic Effect, Causing Downregulation of Glycolysis, Epithelial-Mesenchymal Transition, and EGFR-Signaling Pathway Activation in Lung Cancer Cells [J].
Barrios-Bernal, Pedro ;
Hernandez-Pedro, Norma ;
Orozco-Morales, Mario ;
Viedma-Rodriguez, Rubi ;
Lucio-Lozada, Jose ;
Avila-Moreno, Federico ;
Cardona, Andres F. ;
Rosell, Rafael ;
Arrieta, Oscar .
PHARMACEUTICALS, 2022, 15 (03)
[5]  
Bethune Gillian, 2010, J Thorac Dis, V2, P48
[6]   Acquired resistance to TKIs in solid tumours: learning from lung cancer [J].
Camidge, D. Ross ;
Pao, William ;
Sequist, Lecia V. .
NATURE REVIEWS CLINICAL ONCOLOGY, 2014, 11 (08) :473-481
[7]  
Chen X, 2023, Bioinform Cancer Ther, V18, P190
[8]   Amivantamab plus lazertinib in osimertinib-relapsed EGFR-mutant advanced non-small cell lung cancer: a phase 1 trial [J].
Cho, Byoung Chul ;
Kim, Dong-Wan ;
Spira, Alexander I. ;
Gomez, Jorge E. ;
Haura, Eric B. ;
Kim, Sang-We ;
Sanborn, Rachel E. ;
Cho, Eun Kyung ;
Lee, Ki Hyeong ;
Minchom, Anna ;
Lee, Jong-Seok ;
Han, Ji-Youn ;
Nagasaka, Misako ;
Sabari, Joshua K. ;
Ou, Sai-Hong Ignatius ;
Lorenzini, Patricia ;
Bauml, Joshua M. ;
Curtin, Joshua C. ;
Roshak, Amy ;
Gao, Grace ;
Xie, John ;
Thayu, Meena ;
Knoblauch, Roland E. ;
Park, Keunchil .
NATURE MEDICINE, 2023, 29 (10) :2577-+
[9]   MetaboAnalyst 4.0: towards more transparent and integrative metabolomics analysis [J].
Chong, Jasmine ;
Soufan, Othman ;
Li, Carin ;
Caraus, Iurie ;
Li, Shuzhao ;
Bourque, Guillaume ;
Wishart, David S. ;
Xia, Jianguo .
NUCLEIC ACIDS RESEARCH, 2018, 46 (W1) :W486-W494
[10]   Tracking the Evolution of Resistance to ALK Tyrosine Kinase Inhibitors Through Longitudinal Analysis of Circulating Tumor DNA [J].
Dagogo-Jack, Ibiayi ;
Brannon, A. Rose ;
Ferris, Lorin A. ;
Campbell, Catarina D. ;
Lin, Essica J. ;
Schultz, Katherine R. ;
Ackil, Jennifer ;
Stevens, Sara ;
Dardaei, Leila ;
Yoda, Satoshi ;
Hubbeling, Harper ;
Digumarthy, Subba R. ;
Riester, Markus ;
Hata, Aaron N. ;
Sequist, Lecia, V ;
Lennes, Inga T. ;
Iafrate, Anthony John ;
Heist, Rebecca S. ;
Azzoli, Christopher G. ;
Farago, Anna F. ;
Engelman, Jeffrey A. ;
Lennerz, Jochen K. ;
Benes, Cyril H. ;
Leary, Rebecca J. ;
Shaw, Alice T. ;
Gainor, Justin E. .
JCO PRECISION ONCOLOGY, 2018, 2 :1-14