<monospace>bayesTPC</monospace>: Bayesian inference for thermal performance curves in R

被引:0
作者
Sorek, Sean [1 ]
Smith Jr, John W. [1 ,2 ]
Huxley, Paul J. [1 ]
Johnson, Leah R. [1 ]
机构
[1] Virginia Tech, Stat, Blacksburg, VA 24061 USA
[2] Montana State Univ, Math Sci, Bozeman, MT USA
来源
METHODS IN ECOLOGY AND EVOLUTION | 2025年 / 16卷 / 04期
基金
美国国家科学基金会;
关键词
Bayesian statistics; ecology; ectotherms; thermal performance curves (TPCs); traits; ECTOTHERMS;
D O I
10.1111/2041-210X.70004
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
Reliable predictions of ectotherm responses to climatic warming are important because many of these organisms perform important roles that can directly impact human society. Thermal performance curves (TPCs) provide useful information on the physiological constraints that limit the capacity of these temperature-sensitive organisms to exist and grow. NLS pipelines for fitting TPCs are widely available, but these approaches rely on assumptions that can yield unreliable parameter estimates. We present bayesTPC, an R package for fitting TPCs to trait responses using the nimble language and machinery as the underlying engine for Markov Chain Monte Carlo. bayesTPC aims to support the adoption of Bayesian approaches in thermal physiology, and promote TPC fitting that adequately quantifies uncertainty.
引用
收藏
页码:687 / 697
页数:11
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