Direct cardiac reprogramming: Toward the era of multi-omics analysis

被引:0
作者
Liu, Mengxin [1 ,2 ]
Liu, Jie [1 ,2 ]
Zhang, Tong [1 ,2 ,3 ]
Wang, Li [1 ,2 ]
机构
[1] Wuhan Univ, Inst Myocardial Injury & Repair, Dept Cardiol, Zhongnan Hosp, Wuhan 430071, Peoples R China
[2] Wuhan Univ, Med Res Inst, Frontier Sci Ctr Immunol & Metab, Wuhan 430071, Peoples R China
[3] Hubei Univ, Sch Life Sci, State Key Lab Biocatalysis & Enzyme Engn, Wuhan 430062, Peoples R China
来源
CELL INSIGHT | 2022年 / 1卷 / 06期
基金
中国国家自然科学基金;
关键词
Heart regeneration; iCM reprogramming; Multi-omics; IN-VIVO; HUMAN FIBROBLASTS; GENE-EXPRESSION; CARDIOMYOCYTES; REVEALS; CELLS; HEART; CONVERSION; SUPPRESSION; GENERATION;
D O I
10.1016/j.cellin.2022.100058
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Limited regenerative capacity of adult cardiomyocytes precludes heart repair and regeneration after cardiac injury. Direct cardiac reprograming that converts scar-forming cardiac fibroblasts (CFs) into functional inducedcardiomyocytes (iCMs) offers promising potential to restore heart structure and heart function. Significant advances have been achieved in iCM reprogramming using genetic and epigenetic regulators, small molecules, and delivery strategies. Recent researches on the heterogeneity and reprogramming trajectories elucidated novel mechanisms of iCM reprogramming at single cell level. Here, we review recent progress in iCM reprogramming with a focus on multi-omics (transcriptomic, epigenomic and proteomic) researches to investigate the cellular and molecular machinery governing cell fate conversion. We also highlight the future potential using multi-omics approaches to dissect iCMs conversion for clinal applications.
引用
收藏
页数:8
相关论文
共 72 条
[21]   Direct Reprogramming of Fibroblasts into Functional Cardiomyocytes by Defined Factors [J].
Ieda, Masaki ;
Fu, Ji-Dong ;
Delgado-Olguin, Paul ;
Vedantham, Vasanth ;
Hayashi, Yohei ;
Bruneau, Benoit G. ;
Srivastava, Deepak .
CELL, 2010, 142 (03) :375-386
[22]   MicroRNA-Mediated In Vitro and In Vivo Direct Reprogramming of Cardiac Fibroblasts to Cardiomyocytes [J].
Jayawardena, Tilanthi M. ;
Egemnazarov, Bakytbek ;
Finch, Elizabeth A. ;
Zhang, Lunan ;
Payne, J. Alan ;
Pandya, Kumar ;
Zhang, Zhiping ;
Rosenberg, Paul ;
Mirotsou, Maria ;
Dzau, Victor J. .
CIRCULATION RESEARCH, 2012, 110 (11) :1465-+
[23]  
Khush KK, 2019, J HEART LUNG TRANSPL, V38, P1056, DOI 10.1016/j.healun.2019.08.004
[24]   Ultraefficient extracellular vesicle-guided direct reprogramming of fibroblasts into functional cardiomyocytes [J].
Kim, Hyosuk ;
Song, Byeong-Wook ;
Park, Soon-Jung ;
Choi, Seong Woo ;
Moon, Hanbyeol ;
Hwang, Ki-Chul ;
Kang, Sun-Woong ;
Moon, Sung-Hwan ;
Yang, Yoosoo ;
Kwon, Ick Chan ;
Kim, Sun Hwa .
SCIENCE ADVANCES, 2022, 8 (08)
[25]   Soft Matrix Promotes Cardiac Reprogramming via Inhibition of YAP/TAZ and Suppression of Fibroblast Signatures [J].
Kurotsu, Shota ;
Sadahiro, Taketaro ;
Fujita, Ryo ;
Tani, Hidenori ;
Yamakawa, Hiroyuki ;
Tamura, Fumiya ;
Isomi, Mari ;
Kojima, Hidenori ;
Yamada, Yu ;
Abe, Yuto ;
Murakata, Yoshiko ;
Akiyama, Tatsuya ;
Muraoka, Naoto ;
Harada, Ichiro ;
Suzuki, Takeshi ;
Fukuda, Keiichi ;
Ieda, Masaki .
STEM CELL REPORTS, 2020, 15 (03) :612-628
[26]   A regulatory pathway involving Notch1/β-catenin/Isl1 determines cardiac progenitor cell fate [J].
Kwon, Chulan ;
Qian, Li ;
Cheng, Paul ;
Nigam, Vishal ;
Arnold, Joshua ;
Srivastava, Deepak .
NATURE CELL BIOLOGY, 2009, 11 (08) :951-U96
[27]   Tissue-engineered 3-dimensional (3D) microenvironment enhances the direct reprogramming of fibroblasts into cardiomyocytes by microRNAs [J].
Li, Yanzhen ;
Dal-Pra, Sophie ;
Mirotsou, Maria ;
Jayawardena, Tilanthi M. ;
Hodgkinson, Conrad P. ;
Bursac, Nenad ;
Dzau, Victor J. .
SCIENTIFIC REPORTS, 2016, 6
[28]   Cells of the adult human heart [J].
Litvinukova, Monika ;
Talavera-Lopez, Carlos ;
Maatz, Henrike ;
Reichart, Daniel ;
Worth, Catherine L. ;
Lindberg, Eric L. ;
Kanda, Masatoshi ;
Polanski, Krzysztof ;
Heinig, Matthias ;
Lee, Michael ;
Nadelmann, Emily R. ;
Roberts, Kenny ;
Tuck, Liz ;
Fasouli, Eirini S. ;
DeLaughter, Daniel M. ;
McDonough, Barbara ;
Wakimoto, Hiroko ;
Gorham, Joshua M. ;
Samari, Sara ;
Mahbubani, Krishnaa T. ;
Saeb-Parsy, Kourosh ;
Patone, Giannino ;
Boyle, Joseph J. ;
Zhang, Hongbo ;
Zhang, Hao ;
Viveiros, Anissa ;
Oudit, Gavin Y. ;
Bayraktar, Omer Ali ;
Seidman, J. G. ;
Seidman, Christine E. ;
Noseda, Michela ;
Hubner, Norbert ;
Teichmann, Sarah A. .
NATURE, 2020, 588 (7838) :466-+
[29]   Single-cell transcriptomics reconstructs fate conversion from fibroblast to cardiomyocyte [J].
Liu, Ziqing ;
Wang, Li ;
Welch, Joshua D. ;
Ma, Hong ;
Zhou, Yang ;
Vaseghi, Haley Ruth ;
Yu, Shuo ;
Wall, Joseph Blake ;
Alimohamadi, Sahar ;
Zheng, Michael ;
Yin, Chaoying ;
Shen, Weining ;
Prins, Jan F. ;
Liu, Jiandong ;
Qian, Li .
NATURE, 2017, 551 (7678) :100-+
[30]   Re-patterning of H3K27me3, H3K4me3 and DNA methylation during fibroblast conversion into induced cardiomyocytes [J].
Liu, Ziqing ;
Chen, Olivia ;
Zheng, Michael ;
Wang, Li ;
Zhou, Yang ;
Yin, Chaoying ;
Liu, Jiandong ;
Qian, Li .
STEM CELL RESEARCH, 2016, 16 (02) :507-518