Draft genome sequence of Vreelandella neptunia strain 04GJ23 isolated from the underwater Hawaii seamounts

被引：0

作者：

Darden, Brynne ^{[1
]}

Johnson, Gabriel ^{[1
]}

Busch, Grace ^{[1
]}

Sharma, Indu ^{[1
]}

机构：

[1] Hampton Univ, Hampton, VA 23668 USA

来源：

MICROBIOLOGY RESOURCE ANNOUNCEMENTS | 2025年 / 14卷 / 06期

基金：

美国国家科学基金会;

关键词：

environmental microbiology; microbial ecology; microbial genomics; TOOL;

D O I：

10.1128/mra.00882-24

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

We report a draft genome sequence for Vreelandella neptunia strain 04GJ23 isolated from the underwater Hawaii seamounts. The whole-genome sequence will help understand the ecology and evolution of various ecotypes that are physiologically distinct from the surrounding environments.

引用

收藏

页数：3

相关论文

共 24 条

[1] Polyhydroxyalkanoates (PHA) from Halomonas pacifica ASL10 and Halomonas salifodiane ASL11 isolated from Mariout salt lakes [J].

Abd El-malek, Fady ;

Farag, Aida ;

Omar, Sanaa ;

Khairy, Heba .

INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2020, 161 :1318-1328

[2] Metal bioremediation potential of the halophilic bacterium, Halomonas sp. strain WQL9 isolated from Lake Qarun, Egypt [J].

Abdel-Razik, Mahmoud A. ;

Azmy, Ahmed F. ;

Khairalla, Ahmed S. ;

AbdelGhani, Sameh .

EGYPTIAN JOURNAL OF AQUATIC RESEARCH, 2020, 46 (01) :19-25

[3] Green Synthesis of Bioplastics from Microalgae: A State-of-the-Art Review [J].

Adetunji, Adegoke Isiaka ;

Erasmus, Mariana .

POLYMERS, 2024, 16 (10)

[4]

ALTSCHUL SF, 1990, J MOL BIOL, V215, P403, DOI 10.1006/jmbi.1990.9999

[5] SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing [J].

Bankevich, Anton ;

Nurk, Sergey ;

Antipov, Dmitry ;

Gurevich, Alexey A. ;

Dvorkin, Mikhail ;

Kulikov, Alexander S. ;

Lesin, Valery M. ;

Nikolenko, Sergey I. ;

Son Pham ;

Prjibelski, Andrey D. ;

Pyshkin, Alexey V. ;

Sirotkin, Alexander V. ;

Vyahhi, Nikolay ;

Tesler, Glenn ;

Alekseyev, Max A. ;

Pevzner, Pavel A. .

JOURNAL OF COMPUTATIONAL BIOLOGY, 2012, 19 (05) :455-477

[6] Trimmomatic: a flexible trimmer for Illumina sequence data [J].

Bolger, Anthony M. ;

Lohse, Marc ;

Usadel, Bjoern .

BIOINFORMATICS, 2014, 30 (15) :2114-2120

[7] trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses [J].

Capella-Gutierrez, Salvador ;

Silla-Martinez, Jose M. ;

Gabaldon, Toni .

BIOINFORMATICS, 2009, 25 (15) :1972-1973

[8] A long-awaited taxogenomic investigation of the family Halomonadaceae [J].

de la Haba, Rafael R. ;

Arahal, David R. ;

Sanchez-Porro, Cristina ;

Chuvochina, Maria ;

Wittouck, Stijn ;

Hugenholtz, Philip ;

Ventosa, Antonio .

FRONTIERS IN MICROBIOLOGY, 2023, 14

[9] Accelerated Profile HMM Searches [J].

Eddy, Sean R. .

PLOS COMPUTATIONAL BIOLOGY, 2011, 7 (10)

[10] MUSCLE: multiple sequence alignment with high accuracy and high throughput [J].

Edgar, RC .

NUCLEIC ACIDS RESEARCH, 2004, 32 (05) :1792-1797