Synthesis, Biological Evaluation, in Silico ADMET Prediction, Molecular Docking and Dynamics Studies of 4-phenoxyphenyl-thiazole-Schiff Base Derivatives

被引:0
作者
Karmokar, Setu [1 ]
Das, Monika [1 ]
Marufa, Sumita Saznin [1 ]
Afrin, Sohana [1 ]
Debnath, Joya Rani [1 ]
Alam, Mohammad Sayed [1 ]
Nishino, Hiroshi [2 ]
Haque, Md. Aminul [1 ]
Rahman, Mohammad Mostafizur [1 ]
机构
[1] Jagannath Univ, Dept Chem, Dhaka, Bangladesh
[2] Kumamoto Univ, Grad Sch Sci & Technol, Dept Chem, Kumamoto, Japan
关键词
antimicrobial; antioxidant; docking; MD simulation; synthesis; THIAZOLE DERIVATIVES; CRYSTAL-STRUCTURE; DESIGN; INHIBITORS; MOIETY;
D O I
10.1002/jbt.70362
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A series of novel thiazole-Schiff base analogs (2a-2i) were synthesized through a multicomponent reaction involving thiosemicarbazide, 4-phenoxybenzaldehyde, and alpha-haloketone/phenacyl bromide derivatives. IR, 1H NMR, and HRMS spectroscopic techniques characterized the newly synthesized derivatives. These compounds were subsequently employed for their antimicrobial and antioxidant activities using agar disc diffusion and DPPH free radical scavenging methods. The multi-faceted activity of compound 2c was revealed in both In Vitro experiments. It exhibited the highest potency against Bacillus subtilis (26.0 +/- 1.0 mm) and Aspergillus niger (22.3 +/- 0.6 mm) which exceeded the inhibitory value of standard ceftriaxone (20.7 +/- 0.6 mm) and amphotericin B (8.7 +/- 0.6 mm), respectively. Additionally, 2c demonstrated a remarkable sevenfold increase in antioxidant capability (IC50 = 7.17 +/- 2.61 mu g/mL) compared to the standard ascorbic acid (IC50 = 49.69 +/- 19.18 mu g/mL). The in silico ADMET prediction demonstrated that most synthesized compounds adhered to Lipinski's rule of five and Veber's rule, with 2i being the exception with one violation. Molecular docking studies and dynamics simulation were conducted to explore potential binding sites, interactions, and stability of the ligand-protein complexes, providing insights aligned with the In Vitro results.
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页数:16
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共 54 条
[11]   Synthesis of a small library of 2-phenoxy-1,4-naphthoquinone and 2-phenoxy-1,4-anthraquinone derivatives bearing anti-trypanosomal and anti-leishmanial activity [J].
Bolognesi, Maria Laura ;
Lizzi, Federica ;
Perozzo, Remo ;
Brun, Reto ;
Cavalli, Andrea .
BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2008, 18 (07) :2272-2276
[12]   Synthesis, Antiproliferative Activity and Molecular Properties Predictions of Galloyl Derivatives [J].
da Silva, Marciane Maximo ;
Comin, Marina ;
Duarte, Thiago Santos ;
Foglio, Mary Ann ;
de Carvalho, Joao Ernesto ;
Vieira, Maria do Carmo ;
Nazari Formagio, Anelise Samara .
MOLECULES, 2015, 20 (04) :5360-5373
[13]   Natural Bioactive Thiazole-Based Peptides from Marine Resources: Structural and Pharmacological Aspects [J].
Dahiya, Rajiv ;
Dahiya, Sunita ;
Fuloria, Neeraj Kumar ;
Kumar, Suresh ;
Mourya, Rita ;
Chennupati, Suresh, V ;
Jankie, Satish ;
Gautam, Hemendra ;
Singh, Sunil ;
Karan, Sanjay Kumar ;
Maharaj, Sandeep ;
Fuloria, Shivkanya ;
Shrivastava, Jyoti ;
Agarwal, Alka ;
Singh, Shamjeet ;
Kishor, Awadh ;
Jadon, Gunjan ;
Sharma, Ajay .
MARINE DRUGS, 2020, 18 (06)
[14]   Crystal structure of human peroxiredoxin 5, a novel type of mammalian peroxiredoxin at 1.5 Å resolution [J].
Declercq, JP ;
Evrard, C ;
Clippe, A ;
Vander Stricht, D ;
Bernard, A ;
Knoops, B .
JOURNAL OF MOLECULAR BIOLOGY, 2001, 311 (04) :751-759
[15]   In vitro antibacterial, antioxidant activities, molecular docking, and ADMET analysis of phytochemicals from roots of Hydnora johannis [J].
Degfie, Teshome ;
Endale, Milkyas ;
Tafese, Tarekegn ;
Dekebo, Aman ;
Shenkute, Kebede .
APPLIED BIOLOGICAL CHEMISTRY, 2022, 65 (01)
[16]   A Brief Review on Schiff Base, Synthesis, and Their Antimicrobial Activities [J].
Dhedan, Ruaa M. ;
Alsahib, Sanaa A. ;
Ali, Rana Abid .
RUSSIAN JOURNAL OF BIOORGANIC CHEMISTRY, 2023, 49 (SUPPL 1) :S31-S52
[17]   Synthesis, in silico molecular docking analysis, pharmacokinetic properties and evaluation of antibacterial and antioxidant activities of fluoroquinolines [J].
Fekadu, Mona ;
Zeleke, Digafie ;
Abdi, Bayan ;
Guttula, Anuradha ;
Eswaramoorthy, Rajalakshmanan ;
Melaku, Yadessa .
BMC CHEMISTRY, 2022, 16 (01)
[18]   Molecular Dynamics Simulations: Advances and Applications [J].
Filipe, Hugo A. L. ;
Loura, Luis M. S. .
MOLECULES, 2022, 27 (07)
[19]  
Gomha SM, 2021, DRUG DES DEV THER, V15, P659, DOI [10.2147/DODT.S291579, 10.2147/DDDT.S291579]
[20]   DPPH Radical Scavenging Assay [J].
Gulcin, Ilhami ;
Alwasel, Saleh H. .
PROCESSES, 2023, 11 (08)