Decoding the quantitative structure-activity relationship and astringency formation mechanism of oxygenated aromatic compounds

被引:0
作者
Zhang, Zhibin [1 ]
Pan, Fei [2 ]
Chen, Qiong [1 ]
Guo, Tianyang [1 ]
Song, Huanlu [1 ]
机构
[1] Beijing Technol & Business Univ, Sch Food & Hlth, Beijing 100048, Peoples R China
[2] Chinese Acad Agr Sci, Inst Apicultural Res, Beijing 100093, Peoples R China
基金
中国国家自然科学基金;
关键词
Astringency; Oxygenated aromatic compounds; Quantitative structure-activity relationship; (QSAR); Machine learning; Molecular dynamics simulation; TASTE;
D O I
10.1016/j.foodres.2025.116421
中图分类号
TS2 [食品工业];
学科分类号
0832 ;
摘要
Astringency is a common sensory experience in the mouth, characterized by dryness, roughness, and puckering. Due to the inefficiency and expense of conventional astringency evaluation methods, the quantitative structureactivity relationship (QSAR) modeling correlates molecular structure with sensory feature, offering a scalable computational alternative. First, 54 oxygenated aromatic compounds were comprehensively collected, followed by molecular fingerprint similarity (MFS)-based hierarchical clustering for structural pattern classification. Subsequently, six machine learning regression models were constructed for predicting the astringency thresholds of the compounds, and the results indicated that the AdaBoost model performed the best, with an R2 of 0.778 and MSE of 0.058. Furthermore, the Shapley Additive exPlanations (SHAP) method was applied to interpret this model, revealing that BCUT2D_LOGPLOW and VSA_Estate1 were the most critical descriptors governing astringency thresholds. Two natural astringent oxygenated aromatic compounds were successfully identified through molecular fingerprint recognition and the Maximum Common Substructure (MCS) algorithm, and their astringency thresholds were predicted by the established model. The feasibility of the model was further validated through sensory experiments, where the predicted astringency thresholds closely matched the human astringency thresholds. The interaction mechanisms of astringent compounds were systematically investigated through turbidity measurements, zeta potential analysis, and molecular dynamics (MD) simulations. Results demonstrated that the protein-ligand complex aggregation was predominantly driven by hydrogen bonding and hydrophobic interactions. Therefore, the integration of QSAR and MD enables feature predictive frameworks to advance astringency-focused food development.
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页数:11
相关论文
共 49 条
[31]   Synthesis and Physical Properties of Trioxotriangulene Having Methoxy and Hydroxy Groups at α-Positions: Electronic and Steric Effects of Substituent Groups and Intramolecular Hydrogen Bonds [J].
Murata, Tsuyoshi ;
Yamamoto, Yosuke ;
Ueda, Akira ;
Ise, Tomoaki ;
Shiomi, Daisuke ;
Sato, Kazunobu ;
Takui, Takeji ;
Morita, Yasushi .
JOURNAL OF ORGANIC CHEMISTRY, 2021, 86 (15) :10154-10165
[32]   Molecular mechanism of high-pressure processing regulates the aggregation of major royal jelly proteins [J].
Pan, Fei ;
Li, Xiangxin ;
Tuersuntuoheti, Tuohetisayipu ;
Wang, Wenqian ;
Zheng, Xing ;
Fang, Xiaoming ;
Tian, Wenli ;
Peng, Wenjun .
FOOD HYDROCOLLOIDS, 2023, 144
[33]  
Pedregosa F, 2011, J MACH LEARN RES, V12, P2825, DOI 10.1145/2786984.2786995
[34]   Extended-Connectivity Fingerprints [J].
Rogers, David ;
Hahn, Mathew .
JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2010, 50 (05) :742-754
[35]   Soy Isoflavones and Other Isoflavonoids Activate the Human Bitter Taste Receptors hTAS2R14 and hTAS2R39 [J].
Roland, Wibke S. U. ;
Vincken, Jean-Paul ;
Gouka, Robin J. ;
van Buren, Leo ;
Gruppen, Harry ;
Smit, Gerrit .
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2011, 59 (21) :11764-11771
[36]   Human saliva and model saliva at bulk to adsorbed phases - similarities and differences [J].
Sarkar, Anwesha ;
Xu, Feng ;
Lee, Seunghwan .
ADVANCES IN COLLOID AND INTERFACE SCIENCE, 2019, 273
[37]   Hydrophobilization of Furan-Containing Polyurethanes via Diels-Alder Reaction with Fatty Maleimides [J].
Schmidt, Philipp ;
Eschig, Steven .
POLYMERS, 2019, 11 (08)
[38]   Predicting and improving complex beer flavor through machine learning [J].
Schreurs, Michiel ;
Piampongsant, Supinya ;
Roncoroni, Miguel ;
Cool, Lloyd ;
Herrera-Malaver, Beatriz ;
Vanderaa, Christophe ;
Thesseling, Florian A. ;
Kreft, Lukasz ;
Botzki, Alexander ;
Malcorps, Philippe ;
Daenen, Luk ;
Wenseleers, Tom ;
Verstrepen, Kevin J. .
NATURE COMMUNICATIONS, 2024, 15 (01)
[39]   Sensory-guided decomposition of red currant juice (Ribes rubrum) and structure determination of key astringent compounds [J].
Schwarz, Bernd ;
Hofmann, Thomas .
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2007, 55 (04) :1394-1404
[40]   Identification of Novel Orosensory Active Molecules in Cured Vanilla Beans (Vanilla planifolia) [J].
Schwarz, Bernd ;
Hofman, Thomas .
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2009, 57 (09) :3729-3737