Theoretical Study on the Metabolic Mechanism of Heptachlor in Human Cytochrome P450 Enzymes

被引:0
|
作者
Zhao, Xuerui [1 ]
Zhang, Hao [1 ]
Shen, Xiaoli [1 ]
Zheng, Qingchuan [2 ]
Wang, Song [1 ]
机构
[1] Jilin Univ, Inst Theoret Chem, Changchun 130021, Peoples R China
[2] Jilin Univ, Sch Pharmaceut Sci, Changchun 130021, Peoples R China
关键词
heptachlor; cytochrome P450 enzyme; metabolic mechanism; MD simulation; QM calculation; MOLECULAR-DYNAMICS; SIDE PRODUCTS; COMPOUND-I; P450; 2A6; 3A4; SELECTIVITY; REACTIVITY; OXIDATION; EPOXIDE;
D O I
10.3390/ijms26052021
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Heptachlor (HEP) is an insecticide metabolized by cytochrome P450 (CYP) enzymes in the human liver, resulting in the formation of heptachlor epoxide (HEPX). HEPX can persist in the human body for a long duration. Therefore, it can be extremely harmful. A comprehensive understanding of HEP's metabolic fate may provide a theoretical basis for mitigating associated hazards. However, the specific human CYP isoforms that metabolize HEP, and their metabolic mechanisms, remain unclear. In this study, eight human CYP isoforms were used as catalytic enzymes to investigate the metabolic mechanism of HEP using molecular docking, molecular dynamics simulations, and quantum mechanical calculations. These results indicate that HEP primarily binds to CYP enzymes through hydrophobic interactions, and that the binding positions of HEP are determined by the composition and shape of the hydrophobic pockets near the active site. Based on the reaction distance, CYP2A6, CYP3A4, and CYP3A5 were the only three enzymes that could metabolize HEP. The epoxidation of HEP catalyzed by the doublet state of compound I was effectively concerted, and the rate-determining step was the electrophilic attack of the oxygen atom on HEP. The energy barriers of the rate-determining step vary significantly among different enzymes. A comparison of these energy barriers suggested that CYP3A5 is the most likely enzyme for HEP catalysis in humans.
引用
收藏
页数:22
相关论文
共 50 条
  • [31] STEREOSELECTIVE METABOLISM OF ONDANSETRON BY HUMAN CYTOCHROME P450 ENZYMES
    Li, Qiang
    Chen, Xiaoyan
    Zhong, Dafang
    Duan, Mingyu
    DRUG METABOLISM REVIEWS, 2008, 40 : 205 - 205
  • [32] Stereoselective metabolism of omeprazole by human cytochrome P450 enzymes
    Äbelö, A
    Andersson, TB
    Antonsson, M
    Naudot, AK
    Skånberg, I
    Weidolf, L
    DRUG METABOLISM AND DISPOSITION, 2000, 28 (08) : 966 - 972
  • [33] The Oxidative Metabolism of Dimemorfan by Human Cytochrome P450 Enzymes
    Chou, Yueh-Ching
    Chung, Yu-Ting
    Liu, Tsung-Yun
    Wang, Szu-Yu
    Chau, Gar-Yang
    Chi, Chin-Wen
    Soucek, Pavel
    Krausz, Kristopher W.
    Gelboin, Harry V.
    Lee, Chen-Hsen
    Ueng, Yune-Fang
    JOURNAL OF PHARMACEUTICAL SCIENCES, 2010, 99 (02) : 1063 - 1077
  • [34] Bioactivation of tamoxifen by recombinant human cytochrome P450 enzymes
    Notley, LM
    de Wolf, CJF
    Wunsch, RM
    Lancaster, RG
    Gillam, EMJ
    CHEMICAL RESEARCH IN TOXICOLOGY, 2002, 15 (05) : 614 - 622
  • [35] Developmental expression of cytochrome P450 enzymes in human liver
    Hakkola, J
    Tanaka, E
    Pelkonen, O
    PHARMACOLOGY & TOXICOLOGY, 1998, 82 (05): : 209 - 217
  • [36] Structural insights into understudied human cytochrome P450 enzymes
    Machalz, David
    Pach, Szymon
    Bermudez, Marcel
    Bureik, Matthias
    Wolber, Gerhard
    DRUG DISCOVERY TODAY, 2021, 26 (10) : 2456 - 2464
  • [37] Cytochrome P450 Enzymes as Drug Targets in Human Disease
    Guengerich, F. Peter
    DRUG METABOLISM AND DISPOSITION, 2024, 52 (06) : 493 - 497
  • [38] In vitro stability of human recombinant cytochrome P450 enzymes
    Yang, Jiansong
    Tucker, Geoffrey T.
    Rostami-Hodjegan, Amin
    DRUG METABOLISM REVIEWS, 2006, 38 : 102 - 102
  • [39] Ethynyl flavones as inhibitors of human cytochrome P450 enzymes
    Taylor, Shannon F.
    Liu, Jiawang
    Dupart, Patrick
    Foroozesh, Maryam
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2013, 245
  • [40] Approaches to deorphanization of human and microbial cytochrome P450 enzymes
    Guengerich, F. Peter
    Tang, Zhongmei
    Cheng, Qian
    Salamanca-Pinzon, S. Giovanna
    BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS, 2011, 1814 (01): : 139 - 145