A genome-wide association meta-analysis links hidradenitis suppurativa to common and rare sequence variants causing disruption of the Notch and Wnt/β-catenin signaling pathways

被引:0
|
作者
Andersen, Rune Kjaersgaard [1 ,2 ]
Stefansdottir, Lilja [3 ]
Riis, Peter Theut [1 ]
Halldorsson, Gisli [3 ,4 ]
Ferkingstad, Egil [3 ]
Oddsson, Asmundur [3 ]
Walters, Bragi [3 ]
Olafsdottir, Thorunn A. [3 ,5 ]
Rutsdottir, Gudrun [3 ]
Zachariae, Claus [6 ]
Thomsen, Simon Francis [7 ]
Brodersen, Thortsen [8 ]
Dinh, Khoa Manh [9 ,10 ]
Knowlton, Kirk U. [11 ,12 ]
Knight, Stacey [11 ,12 ]
Nadauld, Lincoln D. [13 ]
Banasik, Karina [14 ]
Brunak, Soren [14 ]
Hansen, Thomas Folkmann [15 ]
Hjalgrim, Henrik [16 ,17 ,18 ,19 ]
Sorensen, Erik [9 ]
Mikkelsen, Chirstina [20 ]
Ullum, Henrik [21 ]
Nyegaard, Mette [22 ]
Bruun, Mie Topholm [23 ]
Erikstrup, Christian [10 ,19 ,24 ]
Ostrowski, Sisse Rye [19 ]
Eidsmo, Liv [2 ]
Saunte, Ditte Marie Lindhardt [1 ,19 ]
Sigurgeirsson, Bardur [25 ]
Orvar, Kjartar B. [26 ]
Saemundsdottir, Jona [3 ]
Melsted, Pall [3 ]
Norddahl, Gudmundur L. [3 ]
Sulem, Patrick [3 ]
Stefansson, Hreinn [3 ]
Holm, Hilma [3 ]
Gudbjartsson, Daniel [3 ,4 ]
Thorleifsson, Gudmar [3 ]
Jonsdottir, Ingileif [3 ,5 ]
Pedersen, Ole Birger Vesterager [7 ,19 ]
Jemec, Gregor Borut Ernst [1 ,19 ]
Stefansson, Kari [3 ,5 ]
机构
[1] Univ Copenhagen, Roskilde Hosp, Roskilde, Denmark
[2] Univ Copenhagen, Dept Immunol & Microbiol, LEO Fdn, Skin Immunol Res Ctr, Copenhagen, Denmark
[3] Amgen Inc, deCODE Genet, Reykjavik, Iceland
[4] Univ Iceland, Sch Engn & Nat Sci, Reykjavik, Iceland
[5] Univ Iceland, Fac Med, Reykjavik, Iceland
[6] Univ Copenhagen, Herlev & Gentofte Hosp, Dept Dermatol & Allergy, Hellerup, Denmark
[7] Univ Copenhagen, Bispebjerg Hosp, Dept Dermatol, Copenhagen, Denmark
[8] Zealand Univ Hosp, Dept Clin Immunol, Koge, Denmark
[9] Copenhagen Univ Hosp, Dept Clin Immunol, Rigshosp, Copenhagen, Denmark
[10] Aarhus Univ Hosp, Dept Clin Immunol, Aarhus, Denmark
[11] Intermt Heart Inst, Intermt Med Ctr, Salt Lake City, UT USA
[12] Univ Utah, Sch Med, Salt Lake City, UT USA
[13] Intermt Healthcare, Precis Genom, St George, UT USA
[14] Univ Copenhagen, Novo Nord Fdn Ctr Prot Res, Fac Hlth & Med Sci, Copenhagen, Denmark
[15] Copenhagen Univ Hosp, Danish Headache Ctr, Dept Neurol, Rigshosp Glostrup, Copenhagen, Denmark
[16] Danish Canc Soc, Danish Canc Soc Res Ctr, Copenhagen, Denmark
[17] Statens Serum Inst, Dept Epidemiol Res, Copenhagen, Denmark
[18] Copenhagen Univ Hosp, Dept Hematol, Rigshosp, Copenhagen, Denmark
[19] Univ Copenhagen, Fac Hlth & Med Sci, Dept Clin Med, Copenhagen, Denmark
[20] Univ Copenhagen, Novo Nord Fdn, Fac Hlth & Med Sci, Ctr Basic Metab Res, Copenhagen, Denmark
[21] Statens Serum Inst, Copenhagen, Denmark
[22] Aalborg Univ, Dept Hlth Sci & Technol, Gistrup, Denmark
[23] Odense Univ Hosp, Dept Clin Immunol, Clin Immunol Res Unit, Odense, Denmark
[24] Aarhus Univ, Dept Clin Med, Aarhus, Denmark
[25] Univ Iceland, Fac Med, Dept Dermatol, Reykjavik, Iceland
[26] Landspitali Natl Univ Hosp Iceland, Med, Reykjavik, Iceland
关键词
gamma-secretase; causality; genetics; genome-wide association study; GWAS; hidradenitis suppurativa; inheritance; NOTCH; Notch signaling; pathway analysis; WNT; Wnt signaling; GAMMA-SECRETASE; KERATINOCYTE DIFFERENTIATION; EXPRESSION; MUTATIONS; DISEASE; SKIN; GENE; CONTRIBUTES; PREVALENCE; NCSTN;
D O I
10.1016/j.jaad.2024.11.050
中图分类号
R75 [皮肤病学与性病学];
学科分类号
100206 ;
摘要
Background: The contributions of genetic and environmental risk factors to hidradenitis suppurativa (HS) are both poorly understood. Objective: To identify sequence variants that associate with HS and determine the contribution of environmental risk factors and inflammatory diseases to HS pathogenesis. Methods: A genome-wide association meta-analysis of 4814 HS cases (Denmark: 1977; Iceland: 1266; Finland: 800; UK: 569; and US: 202) and 1.2 million controls, searching for sequence variants associated with HS. Results: We found 8 independent sequence variants associating with HS, 6 common and 2 rare (frequency <1%). Four associations point to candidate causal genes, NCSTN, PSENEN, WNT10A, and TMED10, that all map to the Notch and Wnt/beta-catenin signaling pathways, involved in epidermal keratinization. Limitations: Limited racial diversity may prevent identification of sequence variants of particular importance in non-Caucasian populations. Conclusions: These findings demonstrate that genes and pathways involved in epidermal keratinization are the genetic backbone of HS pathology.
引用
收藏
页码:761 / 772
页数:12
相关论文
共 22 条
  • [1] A genome-wide meta-analysis uncovers six sequence variants conferring risk of vertigo
    Skuladottir, Astros Th
    Bjornsdottir, Gyda
    Nawaz, Muhammad Sulaman
    Petersen, Hannes
    Rognvaldsson, Solvi
    Moore, Kristjan Helgi Swerford
    Olafsson, Pall, I
    Magnusson, Sigurdur H.
    Bjornsdottir, Anna
    Sveinsson, Olafur A.
    Sigurdardottir, Gudrun R.
    Saevarsdottir, Saedis
    Ivarsdottir, Erna, V
    Stefansdottir, Lilja
    Gunnarsson, Bjarni
    Muhlestein, Joseph B.
    Knowlton, Kirk U.
    Jones, David A.
    Nadauld, Lincoln D.
    Hartmann, Annette M.
    Rujescu, Dan
    Strupp, Michael
    Walters, G. Bragi
    Thorgeirsson, Thorgeir E.
    Jonsdottir, Ingileif
    Holm, Hilma
    Thorleifsson, Gudmar
    Gudbjartsson, Daniel F.
    Sulem, Patrick
    Stefansson, Hreinn
    Stefansson, Kari
    COMMUNICATIONS BIOLOGY, 2021, 4 (01)
  • [2] A genome-wide association meta-analysis implicates Hedgehog and Notch signaling in Dupuytren's disease
    Riesmeijer, Sophie A.
    Kamali, Zoha
    Ng, Michael
    Drichel, Dmitriy
    Piersma, Bram
    Becker, Kerstin
    Layton, Thomas B.
    Nanchahal, Jagdeep
    Nothnagel, Michael
    Vaez, Ahmad
    Hennies, Hans Christian
    Werker, Paul M. N.
    Furniss, Dominic
    Nolte, Ilja M.
    NATURE COMMUNICATIONS, 2024, 15 (01)
  • [3] Genome-Wide Meta-Analysis Identifies Multiple Novel Rare Variants to Predict Common Human Infectious Diseases Risk
    Gelemanovic, Andrea
    Ardalic, Tatjana Catipovic
    Pribisalic, Ajka
    Hayward, Caroline
    Kolcic, Ivana
    Polasek, Ozren
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2023, 24 (08)
  • [4] Replication and meta-analysis of common variants identifies a genome-wide significant locus in migraine
    Esserlind, A. -L.
    Christensen, A. F.
    Le, H.
    Kirchmann, M.
    Hauge, A. W.
    Toyserkani, N. M.
    Hansen, T.
    Grarup, N.
    Werge, T.
    Steinberg, S.
    Bettella, F.
    Stefansson, H.
    Olesen, J.
    EUROPEAN JOURNAL OF NEUROLOGY, 2013, 20 (05) : 765 - 772
  • [5] Genome-Wide Association Analysis of Imputed Rare Variants: Application to Seven Common Complex Diseases
    Maegi, Reedik
    Asimit, Jennifer L.
    Day-Williams, Aaron G.
    Zeggini, Eleftheria
    Morris, Andrew P.
    GENETIC EPIDEMIOLOGY, 2012, 36 (08) : 785 - 796
  • [6] Genetic variants underlying risk of endometriosis: insights from meta-analysis of eight genome-wide association and replication datasets
    Rahmioglu, Nilufer
    Nyholt, Dale R.
    Morris, Andrew P.
    Missmer, Stacey A.
    Montgomery, Grant W.
    Zondervan, Krina T.
    HUMAN REPRODUCTION UPDATE, 2014, 20 (05) : 702 - 716
  • [7] Meta-analysis of genome-wide association studies identifies common variants in CTNNA2 associated with excitement-seeking
    Terracciano, A.
    Esko, T.
    Sutin, A. R.
    de Moor, M. H. M.
    Meirelles, O.
    Zhu, G.
    Tanaka, T.
    Giegling, I.
    Nutile, T.
    Realo, A.
    Allik, J.
    Hansell, N. K.
    Wright, M. J.
    Montgomery, G. W.
    Willemsen, G.
    Hottenga, J-J
    Friedl, M.
    Ruggiero, D.
    Sorice, R.
    Sanna, S.
    Cannas, A.
    Raikkonen, K.
    Widen, E.
    Palotie, A.
    Eriksson, J. G.
    Cucca, F.
    Krueger, R. F.
    Lahti, J.
    Luciano, M.
    Smoller, J. W.
    van Duijn, C. M.
    Abecasis, G. R.
    Boomsma, D. I.
    Ciullo, M.
    Costa, P. T., Jr.
    Ferrucci, L.
    Martin, N. G.
    Metspalu, A.
    Rujescu, D.
    Schlessinger, D.
    Uda, M.
    TRANSLATIONAL PSYCHIATRY, 2011, 1 : e49 - e49
  • [8] Genome-wide meta-analysis of observational studies shows common genetic variants associated with macronutrient intake
    Tanaka, Toshiko
    Ngwa, Julius S.
    van Rooij, Frank J. A.
    Zillikens, M. Carola
    Wojczynski, Mary K.
    Frazier-Wood, Alexis C.
    Houston, Denise K.
    Kanoni, Stavroula
    Lemaitre, Rozenn N.
    Luan, Jian'an
    Mikkila, Vera
    Renstrom, Frida
    Sonestedt, Emily
    Zhao, Jing Hua
    Chu, Audrey Y.
    Qi, Lu
    Chasman, Daniel I.
    Otto, Marcia C. de Oliveira
    Dhurandhar, Emily J.
    Feitosa, Mary F.
    Johansson, Ingegerd
    Khaw, Kay-Tee
    Lohman, Kurt K.
    Manichaikul, Ani
    McKeown, Nicola M.
    Mozaffarian, Dariush
    Singleton, Andrew
    Stirrups, Kathleen
    Viikari, Jorma
    Ye, Zheng
    Bandinelli, Stefania
    Barroso, Ines
    Deloukas, Panos
    Forouhi, Nita G.
    Hofman, Albert
    Liu, Yongmei
    Lyytikainen, Leo-Pekka
    North, Kari E.
    Dimitriou, Maria
    Hallmans, Goran
    Kahonen, Mika
    Langenberg, Claudia
    Ordovas, Jose M.
    Uitterlinden, Andre G.
    Hu, Frank B.
    Kalafati, Ioanna-Panagiota
    Raitakari, Olli
    Franco, Oscar H.
    Johnson, Andrew
    Emilsson, Valur
    AMERICAN JOURNAL OF CLINICAL NUTRITION, 2013, 97 (06) : 1395 - 1402
  • [9] Genetic Factors for Coronary Heart Disease and Their Mechanisms: A Meta-Analysis and Comprehensive Review of Common Variants from Genome-Wide Association Studies
    Zarkasi, Khairul Anwar
    Abdullah, Noraidatulakma
    Murad, Nor Azian Abdul
    Ahmad, Norfazilah
    Jamal, Rahman
    DIAGNOSTICS, 2022, 12 (10)
  • [10] Genome-wide association meta-analysis highlights light-induced signaling as a driver for refractive error
    Tedja, Milly S.
    Wojciechowski, Robert
    Hysi, Pirro G.
    Eriksson, Nicholas
    Furlotte, Nicholas A.
    Verhoeven, Virginie J. M.
    Iglesias, Adriana I.
    Meester-Smoor, Magda A.
    Tompson, Stuart W.
    Fan, Qiao
    Khawaja, Anthony P.
    Cheng, Ching-Yu
    Hoehn, Rene
    Yamashiro, Kenji
    Wenocur, Adam
    Grazal, Clare
    Haller, Toomas
    Metspalu, Andres
    Wedenoja, Juho
    Jonas, Jost B.
    Wang, Ya Xing
    Xie, Jing
    Mitchell, Paul
    Foster, Paul J.
    Klein, Barbara E. K.
    Klein, Ronald
    Paterson, Andrew D.
    Hosseini, S. Mohsen
    Shah, Rupal L.
    Williams, Cathy
    Teo, Yik Ying
    Tham, Yih Chung
    Gupta, Preeti
    Zhao, Wanting
    Shi, Yuan
    Saw, Woei-Yuh
    Tai, E-Shyong
    Sim, Xue Ling
    Huffman, Jennifer E.
    Polasek, Ozren
    Hayward, Caroline
    Bencic, Goran
    Rudan, Igor
    Wilson, James F.
    Joshi, Peter K.
    Tsujikawa, Akitaka
    Matsuda, Fumihiko
    Whisenhunt, Kristina N.
    Zeller, Tanja
    van der Spek, Peter J.
    NATURE GENETICS, 2018, 50 (06) : 834 - +