Mutational study of a lytic polysaccharide monooxygenase from Myceliophthora thermophila (MtLPMO9F): Structural insights into substrate specificity and regioselectivity

被引:0
作者
Kosinas, Christos [1 ]
Chorozian, Koar [2 ]
Sandgren, Mats [3 ]
Topakas, Evangelos [2 ]
Dimarogona, Maria [1 ]
机构
[1] Lab Struct Biol & Biotechnol, Dept Chem Engn Univ Patras, Patras, Greece
[2] Natl Tech Univ Athens, Sch Chem Engn, Biotechnol Lab, InduBioCat Grp, Athens, Greece
[3] Swedish Univ Agr Sci, Dept Mol Sci, Uppsala, Sweden
基金
芬兰科学院; 瑞典研究理事会;
关键词
Lytic polysaccharide monooxygenase; Mutational study; Substrate specificity; FUNCTIONAL-CHARACTERIZATION; CELLULOSE; DEGRADATION; MECHANISMS; PRODUCTS; BINDING; FAMILY; ROLES;
D O I
10.1016/j.ijbiomac.2024.138574
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Lytic polysaccharide monooxygenases (LPMOs) are key enzymes for the biotechnological exploitation of lignocellulosic biomass, yet their efficient application depends on the in-depth understanding of their mechanism of action. Here, we describe the structural and mutational characterization of a C4-active LPMO from Myceliophthora thermophila, MtLPMO9F, that belongs to auxiliary activity family 9 (AA9). MtLPMO9F is active on cellulose, cello-oligosaccharides and xyloglucan. The crystal structure of MtLPMO9F catalytic domain, determined at 2.3 & Aring; resolution, revealed a double conformation for loop L3 with a potential implication in the formation of aglycon subsites. Product analysis of reactions with cello-oligosaccharides showed a prevalent -4 to +2 binding mode. Subsequent biochemical characterization of 4 MtLPMO9F point mutants further provided insights in LPMO structure-function relationships regarding both substrate binding and the role of second-coordination sphere residues.
引用
收藏
页数:15
相关论文
共 79 条
  • [1] NMR structure of a lytic polysaccharide monooxygenase provides insight into copper binding, protein dynamics, and substrate interactions
    Aachmann, Finn L.
    Sorlie, Morten
    Skjak-Braek, Gudmund
    Eijsink, Vincent G. H.
    Vaaje-Kolstad, Gustav
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2012, 109 (46) : 18779 - 18784
  • [2] Distinct roles of N- and O-glycans in cellulase activity and stability
    Amore, Antonella
    Knott, Brandon C.
    Supekar, Nitin T.
    Shajahan, Asif
    Azadi, Parastoo
    Zhao, Peng
    Wells, Lance
    Linger, Jeffrey G.
    Hobdey, Sarah E.
    Vander Wall, Todd A.
    Shollenberger, Todd
    Yarbrough, John M.
    Tan, Zhongping
    Crowley, Michael F.
    Himmel, Michael E.
    Decker, Stephen R.
    Beckham, Gregg T.
    Taylor, Larry E., II
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2017, 114 (52) : 13667 - 13672
  • [3] Substrate specificity and regioselectivity of fungal AA9 lytic polysaccharide monooxygenases secreted by Podospora anserina
    Bennati-Granier, Chloe
    Garajova, Sona
    Champion, Charlotte
    Grisel, Sacha
    Haon, Mireille
    Zhou, Simeng
    Fanuel, Mathieu
    Ropartz, David
    Rogniaux, Helene
    Gimbert, Isabelle
    Record, Eric
    Berrin, Jean-Guy
    [J]. BIOTECHNOLOGY FOR BIOFUELS, 2015, 8
  • [4] Molecular mechanism of the chitinolytic peroxygenase reaction
    Bissaro, Bastien
    Streit, Bennett
    Isaksen, Ingvild
    Eijsink, Vincent G. H.
    Beckham, Gregg T.
    DuBois, Jennifer L.
    Rohr, Asmund K.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2020, 117 (03) : 1504 - 1513
  • [5] Structural and Functional Characterization of a Lytic Polysaccharide Monooxygenase with Broad Substrate Specificity
    Borisova, Anna S.
    Isaksen, Trine
    Dimarogona, Maria
    Kognole, Abhishek A.
    Mathiesen, Geir
    Varnai, Aniko
    Rohr, Asmund K.
    Payne, Christina M.
    Sorlie, Morten
    Sandgren, Mats
    Eijsink, Vincent G. H.
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2015, 290 (38) : 22955 - 22969
  • [6] Scission of Glucosidic Bonds by a Lentinus similis Lytic Polysaccharide Monooxygenases Is Strictly Dependent on H2O2 while the Oxidation of Saccharide Products Depends on O2
    Brander, Soren
    Tokin, Radina
    Ipsen, Johan O.
    Jensen, Poul Erik
    Hernandez-Rollan, Cristina
    Norholm, Morten H. H.
    Lo Leggio, Leila
    Dupree, Paul
    Johansen, Katja S.
    [J]. ACS CATALYSIS, 2021, 11 (22) : 13848 - 13859
  • [7] Improved spectrophotometric assay for lytic polysaccharide monooxygenase
    Breslmayr, Erik
    Daly, Sarah
    Pozgajcic, Alen
    Chang, Hucheng
    Rezic, Tonci
    Oostenbrink, Chris
    Ludwig, Roland
    [J]. BIOTECHNOLOGY FOR BIOFUELS, 2019, 12 (01)
  • [8] Regioselectivity of oxidation by a polysaccharide monooxygenase from Chaetomium thermophilum
    Chen, Chen
    Chen, Jinyin
    Geng, Zhigang
    Wang, Meixia
    Liu, Ning
    Li, Duochuan
    [J]. BIOTECHNOLOGY FOR BIOFUELS, 2018, 11
  • [9] MolProbity: all-atom structure validation for macromolecular crystallography
    Chen, Vincent B.
    Arendall, W. Bryan, III
    Headd, Jeffrey J.
    Keedy, Daniel A.
    Immormino, Robert M.
    Kapral, Gary J.
    Murray, Laura W.
    Richardson, Jane S.
    Richardson, David C.
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2010, 66 : 12 - 21
  • [10] Assessing the role of redox partners in TthLPMO9G and its mutants: focus on H2O2 production and interaction with cellulose
    Chorozian, Koar
    Karnaouri, Anthi
    Georgaki-Kondyli, Nefeli
    Karantonis, Antonis
    Topakas, Evangelos
    [J]. BIOTECHNOLOGY FOR BIOFUELS AND BIOPRODUCTS, 2024, 17 (01):