Crystal structure, Hirshfeld surface analysis, DFT optimized molecular structure and the molecular docking studies of 1-[2-(cyanosulfanyl)acetyl]-3-methyl-2,6-bis(4-methylphenyl)piperidin-4-one

被引:4
作者
Karthiga, A. R. [1 ]
Divyabharathi, S. [1 ]
Shalo, R. Reshwen [1 ]
Rajeswari, K. [2 ,3 ]
Vidhyasagar, T. [1 ]
Selvanayagam, S. [4 ]
机构
[1] Annamalai Univ, Dept Chem, Annamalainagar 608002, Chidambaram, India
[2] Annamalai Univ, Dept Chem, Annamalainagar 608002, Chidambaram, India
[3] Govt Arts Coll, PG & Res Dept Chem, Chidambaram 608102, India
[4] Govt Arts Coll, PG & Res Dept Phys, Melur 625106, India
关键词
crystal structure; piperidine derivatives; superposition; C-H center dot center dot center dot O intramolecular interactions; C-H center dot center dot center dot O intermolecular hydrogen bonds; Hirshfeld; surface analysis; QUANTITATIVE-ANALYSIS; INTERMOLECULAR INTERACTIONS; VISUALIZATION; DERIVATIVES; INHIBITORS; PROGRAM;
D O I
10.1107/S2056989024008508
中图分类号
O7 [晶体学];
学科分类号
0702 ; 070205 ; 0703 ; 080501 ;
摘要
The two molecules in the asymmetric unit of the title compound, C23H24N2O2S, have a structural overlap with an r.m.s. deviation of 0.82 angstrom. The piperidine rings adopt a distorted boat conformation. Intra- and intermolecular C-H center dot center dot center dot O hydrogen bonds are responsible for the cohesion of the crystal packing. The intermolecular interactions were quantified and analysed using Hirshfeld surface analysis. The molecular structure optimized by density functional theory (DFT) at the B3LYP/6-311++G(d,p)level is compared with the experimentally determined molecular structure in the solid state.
引用
收藏
页码:1014 / +
页数:16
相关论文
共 26 条
[1]   Single-Crystal Investigation, Hirshfeld Surface Analysis, and DFT Study of Third-Order NLO Properties of Unsymmetrical Acyl Thiourea Derivatives [J].
Ashfaq, Muhammad ;
Tahir, Muhammad Nawaz ;
Muhammad, Shabbir ;
Munawar, Khurram Shahzad ;
Ali, Akbar ;
Bogdanov, Georgii ;
Alarfaji, Saleh S. .
ACS OMEGA, 2021, 6 (46) :31211-31225
[2]   Relationship between electronic properties and drug activity of seven quinoxaline compounds: A DFT study [J].
Behzadi, Hadi ;
Roonasi, Payman ;
Taghipour, Khatoon Assle ;
van der Spoel, David ;
Manzetti, Sergio .
JOURNAL OF MOLECULAR STRUCTURE, 2015, 1091 :196-202
[3]  
Bruker, 2012, APEX2 Bruker AXS Inc
[4]   Recent advances in the chemistry of organic thiocyanates [J].
Castanheiro, Thomas ;
Suffert, Jean ;
Donnard, Morgan ;
Gulea, Mihaela .
CHEMICAL SOCIETY REVIEWS, 2016, 45 (03) :494-505
[5]   Recent progress of direct thiocyanation reactions [J].
Chen, Haixin ;
Shi, Xiaotian ;
Liu, Xiang ;
Zhao, Limin .
ORGANIC & BIOMOLECULAR CHEMISTRY, 2022, 20 (33) :6508-6527
[6]   Antikinetoplastid activity of 3-aryl-5-thiocyanatomethyl-1,2,4-oxadiazoles [J].
Cottrell, DM ;
Capers, J ;
Salem, MM ;
DeLuca-Fradley, K ;
Croft, SL ;
Werbovetz, KA .
BIOORGANIC & MEDICINAL CHEMISTRY, 2004, 12 (11) :2815-2824
[7]   GENERAL DEFINITION OF RING PUCKERING COORDINATES [J].
CREMER, D ;
POPLE, JA .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1975, 97 (06) :1354-1358
[8]   WinGX and ORTEP for Windows: an update [J].
Farrugia, Louis J. .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 2012, 45 :849-854
[9]   Molecular Docking and Structure-Based Drug Design Strategies [J].
Ferreira, Leonardo G. ;
dos Santos, Ricardo N. ;
Oliva, Glaucius ;
Andricopulo, Adriano D. .
MOLECULES, 2015, 20 (07) :13384-13421
[10]   Qmol: A program for molecular visualization on windows-based PCs [J].
Gans, JD ;
Shalloway, D .
JOURNAL OF MOLECULAR GRAPHICS & MODELLING, 2001, 19 (06) :557-+