A comprehensive and systematic analysis of Dihydrolipoamide S-acetyltransferase (DLAT) as a novel prognostic biomarker in pan-cancer and glioma

被引:1
作者
Zhou, Hui [1 ]
Yu, Zhengyu [1 ]
Wang, Zhongwang [1 ]
Tao, Yali [1 ]
Wang, Jinjin [1 ]
Yang, Peipei [1 ]
Yang, Jinrong [1 ]
Niu, Ting [1 ]
机构
[1] Sichuan Univ, West China Hosp, Dept Hematol, Chengdu 610041, Peoples R China
基金
中国国家自然科学基金;
关键词
Dihydrolipoamide S-acetyltransferase (DLAT); Glioma; Prognostic; Immunological; HALLMARKS; CYCLE;
D O I
10.32604/or.2024.048138
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Background: Dihydrolipoamide S-acetyltransferase (DLAT) is a subunit of the pyruvate dehydrogenase complex (PDC), a rate-limiting enzyme complex, that can participate in either glycolysis or the tricarboxylic acid cycle (TCA). However, the pathogenesis is not fully understood. We aimed to perform a more systematic and comprehensive analysis of DLAT in the occurrence and progression of tumors, and to investigate its function in patients' prognosis and immunotherapy. Methods: The differential expression, diagnosis, prognosis, genetic and epigenetic alterations, tumor microenvironment, stemness, immune infiltration cells, function enrichment, single-cell analysis, and drug response across cancers were conducted based on multiple computational tools. Additionally, we validated its carcinogenic effect and possible mechanism in glioma cells. Results: We exhibited that DLAT expression was increased in most tumors, especially in glioma, and affected the survival of tumor patients. DLAT was related to RNA modification genes, DNA methylation, immune infiltration, and immune infiltration cells, including CD4+ T cells, CD8+ T cells, Tregs, and cancer-associated fibroblasts. Single-cell analysis displayed that DLAT might regulate cancer by mediating angiogenesis, inflammation, and stemness. Enrichment analysis revealed that DLAT might take part in the cell cycle pathway. Increased expression of DLAT leads tumor cells to be more resistant to many kinds of compounds, including PI3K beta inhibitors, PKC inhibitors, HSP90 inhibitors, and MEK inhibitors. In addition, glioma cells with DLAT silence inhibited proliferation, migration, and invasion ability, and promoted cell apoptosis. Conclusion: We conducted a comprehensive analysis of DLAT in the occurrence and progression of tumors, and its possible functions and mechanisms. DLAT is a potential diagnostic, prognostic, and immunotherapeutic biomarker for cancer patients.
引用
收藏
页码:1903 / 1919
页数:17
相关论文
共 42 条
[1]   Systematic pan-cancer analysis of tumour purity [J].
Aran, Dvir ;
Sirota, Marina ;
Butte, Atul J. .
NATURE COMMUNICATIONS, 2015, 6
[2]   A Novel Cuproptosis-Related Prognostic Gene Signature and Validation of Differential Expression in Clear Cell Renal Cell Carcinoma [J].
Bian, Zilong ;
Fan, Rong ;
Xie, Lingmin .
GENES, 2022, 13 (05)
[3]   Understanding the tumor immune microenvironment (TIME) for effective therapy [J].
Binnewies, Mikhail ;
Roberts, Edward W. ;
Kersten, Kelly ;
Chan, Vincent ;
Fearon, Douglas F. ;
Merad, Miriam ;
Coussens, Lisa M. ;
Gabrilovich, Dmitry I. ;
Ostrand-Rosenberg, Suzanne ;
Hedrick, Catherine C. ;
Vonderheide, Robert H. ;
Pittet, Mikael J. ;
Jain, Rakesh K. ;
Zou, Weiping ;
Howcroft, T. Kevin ;
Woodhouse, Elisa C. ;
Weinberg, Robert A. ;
Krummel, Matthew F. .
NATURE MEDICINE, 2018, 24 (05) :541-550
[4]   Landscape of Microsatellite Instability Across 39 Cancer Types [J].
Bonneville, Russell ;
Krook, Melanie A. ;
Kautto, Esko A. ;
Miya, Jharna ;
Wing, Michele R. ;
Chen, Hui-Zi ;
Reeser, Julie W. ;
Yu, Lianbo ;
Roychowdhury, Sameek .
JCO PRECISION ONCOLOGY, 2017, 1 :1-15
[5]   PM2.5 promotes NSCLC carcinogenesis through translationally and transcriptionally activating DLAT-mediated glycolysis reprograming [J].
Chen, Qianqian ;
Wang, Yiling ;
Yang, Lin ;
Sun, Liyuan ;
Wen, Yuxin ;
Huang, Yongyi ;
Gao, Kaiping ;
Yang, Wenhan ;
Bai, Feng ;
Ling, Lijuan ;
Zhou, Zizi ;
Zhang, Xiaoming ;
Xiong, Juan ;
Zhai, Rihong .
JOURNAL OF EXPERIMENTAL & CLINICAL CANCER RESEARCH, 2022, 41 (01)
[6]   Mining novel cell glycolysis related gene markers that can predict the survival of colon adenocarcinoma patients [J].
Chen, Sihan ;
Cao, Guodong ;
Wu, Wei ;
Lu, Yida ;
He, Xiaobo ;
Yang, Lei ;
Chen, Ke ;
Chen, Bo ;
Xiong, MaoMing .
BIOSCIENCE REPORTS, 2020, 40
[7]   TMB: a promising immune-response biomarker, and potential spearhead in advancing targeted therapy trials [J].
Choucair, Khalil ;
Morand, Susan ;
Stanbery, Laura ;
Edelman, Gerald ;
Dworkin, Lance ;
Nemunaitis, John .
CANCER GENE THERAPY, 2020, 27 (12) :841-853
[8]   Microsatellite Instability as a Biomarker for PD-1 Blockade [J].
Dudley, Jonathan C. ;
Lin, Ming-Tseh ;
Le, Dung T. ;
Eshleman, James R. .
CLINICAL CANCER RESEARCH, 2016, 22 (04) :813-820
[9]   Multiple Roles of m6A RNA Modification in Translational Regulation in Cancer [J].
Fernandez Rodriguez, Guillermo ;
Cesaro, Bianca ;
Fatica, Alessandro .
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2022, 23 (16)
[10]   Tumour mutational burden as a biomarker for immunotherapy: Current data and emerging concepts [J].
Fumet, Jean-David ;
Truntzer, Caroline ;
Yarchoan, Mark ;
Ghiringhelli, Francois .
EUROPEAN JOURNAL OF CANCER, 2020, 131 :40-50