Advances in Single-cell Multi-omics Analysis Based on Mass Spectrometry

被引:0
作者
Huo, Zhiyuan [1 ,2 ]
Zhou, Jinping [3 ]
Ma, Xiumin [3 ]
Zhou, Yan [1 ,2 ]
Huang, Lin [1 ,2 ]
机构
[1] Shanghai Jiao Tong Univ, Shanghai Chest Hosp, Sch Med, Dept Clin Lab, Shanghai 200030, Peoples R China
[2] Shanghai Jiao Tong Univ, Shanghai Chest Hosp, Inst Thorac Oncol, Sch Med, Shanghai 200030, Peoples R China
[3] Xinjiang Med Univ, Tumor Hosp, Clin Lab Ctr, Urumqi 830011, Peoples R China
来源
CHEMICAL JOURNAL OF CHINESE UNIVERSITIES-CHINESE | 2024年 / 45卷 / 11期
基金
中国国家自然科学基金;
关键词
Single-cell; Mass spectrometry technology; Metabolomics; Proteomics; Multi-omics analysis; METABOLIC FINGERPRINTS; CYTOMETRY; SYSTEM;
D O I
10.7503/cjcu20240389
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
With the rapid development of mass spectrometry technology in recent years, single-cell mass spectrometry has played an increasingly vital role in the field of life sciences. Mass spectrometry has been widely applied to detect the metabolome and proteome of cell populations. The multi-omics technology of single-cell mass spectrometry combines microscopic biology with cutting-edge mass spectrometry analysis, providing a powerful tool for in-depth study at the single-cell level and further clarifying the micro-level complexity of cells. Especially in biomedical applications, single-cell mass spectrometry multi-omics helps to build cell atlas, explore the molecular mechanisms of biological phenomena, and promote the development of precision medicine. Therefore, this article systematically summarizes and reviews the challenges and breakthroughs in the development of mass spectrometry- based single-cell metabolism, proteomics, and multi-omics technologies in recent years, and provides an outlook on its future development trends.
引用
收藏
页数:12
相关论文
共 56 条
[1]   The technological landscape and applications of single-cell multi-omics [J].
Baysoy, Alev ;
Bai, Zhiliang ;
Satija, Rahul ;
Fan, Rong .
NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2023, 24 (10) :695-713
[2]   Ultra-high sensitivity mass spectrometry quantifies single-cell proteome changes upon perturbation [J].
Brunner, Andreas-David ;
Thielert, Marvin ;
Vasilopoulou, Catherine ;
Ammar, Constantin ;
Coscia, Fabian ;
Mund, Andreas ;
Hoerning, Ole B. ;
Bache, Nicolai ;
Apalategui, Amalia ;
Lubeck, Markus ;
Richter, Sabrina ;
Fischer, David S. ;
Raether, Oliver ;
Park, Melvin A. ;
Meier, Florian ;
Theis, Fabian J. ;
Mann, Matthias .
MOLECULAR SYSTEMS BIOLOGY, 2022, 18 (03)
[3]   Deciphering the metabolic heterogeneity of hematopoietic stem cells with single-cell resolution [J].
Cao, Jing ;
Yao, Qi Jason ;
Wu, Jiao ;
Chen, Xiaonan ;
Huang, Lin ;
Liu, Wanshan ;
Qian, Kun ;
Wan, Jing-Jing ;
Zhou, Bo O. .
CELL METABOLISM, 2024, 36 (01) :209-221.e6
[4]   Single-Cell On-Probe Derivatization-Noncontact Nanocarbon Fiber Ionization: Unraveling Cellular Heterogeneity of Fatty Alcohol and Sterol Metabolites [J].
Cao, Yu-Qi ;
Zhang, Li ;
Zhang, Jing ;
Guo, Yin-Long .
ANALYTICAL CHEMISTRY, 2020, 92 (12) :8378-8385
[5]   Single Cell Mass Spectrometry With a Robotic Micromanipulation System for Cell Metabolite Analysis [J].
Chen, Anqi ;
Yan, Mingyue ;
Feng, Jiaxin ;
Bi, Lei ;
Chen, La ;
Hu, Shundi ;
Hong, Huanhuan ;
Shi, Lulu ;
Li, Gangqiang ;
Jin, Baiye ;
Zhang, Xinrong ;
Wen, Luhong .
IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING, 2022, 69 (01) :325-333
[6]   Comprehensive Metabolic Fingerprints Characterize Neuromyelitis Optica Spectrum Disorder by Nanoparticle-Enhanced Laser Desorption/Ionization Mass Spectrometry [J].
Chen, Wei ;
Yu, Haojun ;
Hao, Yong ;
Liu, Wanshan ;
Wang, Ruimin ;
Huang, Yida ;
Wu, Jiao ;
Feng, Lei ;
Guan, Yangtai ;
Huang, Lin ;
Qian, Kun .
ACS NANO, 2023, 17 (20) :19779-19792
[7]   Advances in mass spectrometry based single-cell metabolomics [J].
Duncan, Kyle D. ;
Fyrestam, Jonas ;
Lanekoff, Ingela .
ANALYST, 2019, 144 (03) :782-793
[8]   Laser capture microdissection technology [J].
Espina, Virginia ;
Heiby, Michael ;
Pierobon, Mariaelena ;
Liotta, Lance A. .
EXPERT REVIEW OF MOLECULAR DIAGNOSTICS, 2007, 7 (05) :647-657
[9]   High-throughput single cell metabolomics and cellular heterogeneity exploration by inertial microfluidics coupled with pulsed electric field-induced electrospray ionization-high resolution mass spectrometry [J].
Feng, Disheng ;
Li, Hang ;
Xu, Tianrun ;
Zheng, Fujian ;
Hu, Chunxiu ;
Shi, Xianzhe ;
Xu, Guowang .
ANALYTICA CHIMICA ACTA, 2022, 1221
[10]   Single-Cell Multiomics [J].
Flynn, Emily ;
Almonte-Loya, Ana ;
Fragiadakis, Gabriela K. .
ANNUAL REVIEW OF BIOMEDICAL DATA SCIENCE, 2023, 6 :313-337