Does the seed fall far from the tree? Weak fine-scale genetic structure in a continuous Scots pine population

被引:1
|
作者
Niskanen, Alina K. [1 ,2 ]
Kujala, Sonja T. [3 ]
Karkkainen, Katri [3 ]
Savolainen, Outi [1 ]
Pyhajarvi, Tanja [2 ]
机构
[1] Univ Oulu, Ecol & Genet Res Unit, Oulu 90014, Finland
[2] Univ Helsinki, Dept Forest Sci, Helsinki 00014, Finland
[3] Nat Resources Inst Finland Luke, Paavo Havaksen Tie 3, Oulu 90570, Finland
来源
PEER COMMUNITY JOURNAL | 2024年 / 4卷
基金
芬兰科学院;
关键词
INBREEDING DEPRESSION; POLLEN DISPERSAL; F-STATISTICS; FOREST TREES; SYLVESTRIS; FLOW; DISTANCE; DIFFERENTIATION; ADAPTATION; REGENERATION;
D O I
10.24072/pcjournal.413
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Knowledge of fine-scale spatial genetic structure, i.e., the distribution of genetic diversity at short distances, is important in evolutionary research and in practical applications such as conservation and breeding programs. In trees, related individuals often grow close to each other due to limited seed and/or pollen dispersal. The extent of seed dispersal also limits the speed at which a tree species can spread to new areas. We studied the fine-scale spatial genetic structure of Scots pine (Pinussylvestris) in two naturally regenerated sites located 20 km from each other in continuous south-eastern Finnish forest. We genotyped almost 500 adult trees for 150k SNPs using a custom made Affymetrix array. We detected some pairwise relatedness at short distances, but the average relatedness was low and decreased with increasing distance, as expected. Despite the clustering of related individuals, the sampling sites were not differentiated (FST = 0.0005). According to our results, Scots pine has a large neighborhood size (Nb = 1680-3210), but a relatively short gene dispersal distance (sigma g = 36.5-71.3 m). Knowledge of Scots pine fine-scale spatial genetic structure can be used to define suitable sampling distances for evolutionary studies and practical applications. Detailed empirical estimates of dispersal are necessary both in studying post-glacial recolonization and predicting the response of forest trees to climate change.
引用
收藏
页数:20
相关论文
共 50 条
  • [1] The fine-scale genetic structure of the British population
    Leslie, Stephen
    Winney, Bruce
    Hellenthal, Garrett
    Davison, Dan
    Boumertit, Abdelhamid
    Day, Tammy
    Hutnik, Katarzyna
    Royrvik, Ellen C.
    Cunliffe, Barry
    Lawson, Daniel J.
    Falush, Daniel
    Freeman, Colin
    Pirinen, Matti
    Myers, Simon
    Robinson, Mark
    Donnelly, Peter
    Bodmer, Walter
    NATURE, 2015, 519 (7543) : 309 - +
  • [2] The fine-scale genetic structure of the British population
    Stephen Leslie
    Bruce Winney
    Garrett Hellenthal
    Dan Davison
    Abdelhamid Boumertit
    Tammy Day
    Katarzyna Hutnik
    Ellen C. Royrvik
    Barry Cunliffe
    Daniel J. Lawson
    Daniel Falush
    Colin Freeman
    Matti Pirinen
    Simon Myers
    Mark Robinson
    Peter Donnelly
    Walter Bodmer
    Nature, 2015, 519 : 309 - 314
  • [3] The fine-scale genetic structure and evolution of the Japanese population
    Takeuchi, Fumihiko
    Katsuya, Tomohiro
    Kimura, Ryosuke
    Nabika, Toru
    Isomura, Minoru
    Ohkubo, Takayoshi
    Tabara, Yasuharu
    Yamamoto, Ken
    Yokota, Mitsuhiro
    Liu, Xuanyao
    Saw, Woei-Yuh
    Mamatyusupu, Dolikun
    Yang, Wenjun
    Xu, Shuhua
    Teo, Yik-Ying
    Kato, Norihiro
    PLOS ONE, 2017, 12 (11):
  • [4] Fine-scale genetic population structure of southern pine beetle (Coleoptera: Curculionidae) in Mississippi forests
    Schrey, Natalie M.
    Schrey, Aaron W.
    Heist, Edward J.
    Reeve, John D.
    ENVIRONMENTAL ENTOMOLOGY, 2008, 37 (01) : 271 - 276
  • [5] Nuclear and chloroplast genetic structure indicate fine-scale spatial dynamics in a neotropical tree population
    C Latouche-Hallé
    A Ramboer
    E Bandou
    H Caron
    A Kremer
    Heredity, 2003, 91 : 181 - 190
  • [6] Nuclear and chloroplast genetic structure indicate fine-scale spatial dynamics in a neotropical tree population
    Latouche-Hallé, C
    Ramboer, A
    Bandou, E
    Caron, H
    Kremer, A
    HEREDITY, 2003, 91 (02) : 181 - 190
  • [7] Fine-scale genetic structure of the rice landrace population in Japan
    Kenji Fujino
    Kenta Shirasawa
    Molecular Genetics and Genomics, 2022, 297 : 711 - 718
  • [8] Fine-scale genetic structure of the rice landrace population in Japan
    Fujino, Kenji
    Shirasawa, Kenta
    MOLECULAR GENETICS AND GENOMICS, 2022, 297 (03) : 711 - 718
  • [9] Fine-scale genetic structure and phenotypic divergence of a passerine bird population inhabiting a continuous Mediterranean woodland
    Garrido-Bautista, Jorge
    Comas, Mar
    Jowers, Michael J.
    Smith, Steve
    Penn, Dustin J.
    Bakkali, Mohammed
    Moreno-Rueda, Gregorio
    ROYAL SOCIETY OPEN SCIENCE, 2024, 11 (06):
  • [10] A Fine-Scale Chimpanzee Genetic Map from Population Sequencing
    Auton, Adam
    Fledel-Alon, Adi
    Pfeifer, Susanne
    Venn, Oliver
    Segurel, Laure
    Street, Teresa
    Leffler, Ellen M.
    Bowden, Rory
    Aneas, Ivy
    Broxholme, John
    Humburg, Peter
    Iqbal, Zamin
    Lunter, Gerton
    Maller, Julian
    Hernandez, Ryan D.
    Melton, Cord
    Venkat, Aarti
    Nobrega, Marcelo A.
    Bontrop, Ronald
    Myers, Simon
    Donnelly, Peter
    Przeworski, Molly
    McVean, Gil
    SCIENCE, 2012, 336 (6078) : 193 - 198