RARB genetic variants might contribute to the risk of chronic obstructive pulmonary disease based on a case-control study

被引:0
作者
Huang, Linhui [1 ]
Xu, Wenya [1 ]
Fu, Yihui [1 ]
Yang, Zehua [1 ]
Mo, Rubing [1 ]
Ding, Yipeng [1 ,2 ]
Xie, Tian [1 ]
机构
[1] Hainan Med Univ, Hainan Gen Hosp, Hainan Affiliated Hosp, Dept Pulm & Crit Care Med, Haikou, Peoples R China
[2] Hainan Med Univ, Hainan Affiliated Hosp, Hainan Gen Hosp, Dept Gen Practice, Haikou, Peoples R China
基金
中国国家自然科学基金;
关键词
Chronic obstructive pulmonary disease; susceptibility; RARB; single nucleotide polymorphisms; LUNG-FUNCTION; POLYMORPHISMS; PATHOGENESIS; COPD; LOCI; SNP;
D O I
10.1080/07853890.2024.2445195
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
BackgroundChronic obstructive pulmonary disease (COPD) is a progressive respiratory disease that severely impairs patients' respiratory function and quality of life. RARB is involved in COPD progression by affecting inflammatory reactions, cell proliferation, and apoptosis. The impact of single nucleotide polymorphisms (SNPs) within RARB on COPD susceptibility remains unclear. Here, we aimed to evaluate the association between RARB SNPs and COPD risk.MethodsA total of 270 COPD patients and 271 healthy controls were enrolled. The MassARRAY iPLEX platform tested the genotype of the SNPs. The association was analyzed using logistic regression analysis. The false-positive report probability (FPRP) analysis was performed to validate the significant findings. The relationship between SNPs and RARB expression was evaluated using the GTEx database.ResultsOur study found a significant association between rs6799734 and COPD susceptibility (OR 1.88, p = 0.008, p (FDR) = 0.047). The stratified analysis revealed that this association was particularly pronounced among individuals aged <= 71 years (OR 2.34, p = 0.011, p (FDR) = 0.045), males (OR 2.60, p = 0.002, p (FDR) = 0.013), those with a BMI >= 24 (OR 3.95, p = 0.018, p (FDR) = 0.108), and smokers (OR 2.48, p = 0.020, p (FDR) = 0.120). Additionally, rs1286641 and rs1881706 showed significant associations with COPD risk in females and smokers. These associations were further validated by FPRP analysis. Preliminary mechanism studies indicated that rs1286641 and rs1881706 were related to RARB expression.ConclusionOur findings suggest a potential role of RARB SNPs in influencing COPD risk.
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页数:12
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  • [1] The rs74794265 SNP of the SREK1 Gene is Associated with COPD in Kashi, China
    Abudureheman, Zulipikaer
    Li, Li
    Zhong, XueMei
    Xu, JingRan
    Gong, Hui
    Yilamujiang, Subinuer
    Ren, Jie
    Xie, ChengXin
    Zheng, AiFang
    Tuerxun, Dilala
    Abudukadeer, Ayiguzali
    Aini, Paierda
    Xu, AiMin
    Zou, XiaoGuang
    [J]. INTERNATIONAL JOURNAL OF CHRONIC OBSTRUCTIVE PULMONARY DISEASE, 2021, 16 : 2631 - 2636
  • [2] Pathogenesis of chronic obstructive pulmonary disease: understanding the contributions of gene-environment interactions across the lifespan
    Agusti, Alva
    Melen, Erik
    DeMeo, Dawn L.
    Breyer-Kohansal, Robab
    Faner, Rosa
    [J]. LANCET RESPIRATORY MEDICINE, 2022, 10 (05) : 512 - 524
  • [3] Global Initiative for Chronic Obstructive Lung Disease 2023 Report: GOLD Executive Summary
    Agusti, Alvar
    Celli, Bartolome R.
    Criner, Gerard J.
    Halpin, David
    Anzueto, Antonio
    Barnes, Peter
    Bourbeau, Jean
    Han, MeiLan K.
    Martinez, Fernando J.
    de Oca, Maria Montes
    Mortimer, Kevin
    Papi, Alberto
    Pavord, Ian
    Roche, Nicolas
    Salvi, Sundeep
    Sin, Don D.
    Singh, Dave
    Stockley, Robert
    Varela, M. Victorina Lopez
    Wedzicha, Jadwiga A.
    Vogelmeier, Claus F.
    [J]. EUROPEAN RESPIRATORY JOURNAL, 2023, 61 (04)
  • [4] All-trans-retinoic acid induces RARB-dependent apoptosis via ROS induction and enhances cisplatin sensitivity by NRF2 downregulation in cholangiocarcinoma cells
    Butsri, Siriwoot
    Kukongviriyapan, Veerapol
    Senggunprai, Laddawan
    Kongpetch, Sarinya
    Prawan, Auemduan
    [J]. ONCOLOGY LETTERS, 2022, 23 (06)
  • [5] Chronic obstructive pulmonary disease
    Christenson, Stephanie A.
    Smith, Benjamin M.
    Bafadhel, Mona
    Putcha, Nirupama
    [J]. LANCET, 2022, 399 (10342) : 2227 - 2242
  • [6] HHIP, HDAC4, NCR3 and RARB polymorphisms affect fetal, childhood and adult lung function
    Collins, Samuel A.
    Lucas, Jane S. A.
    Inskip, Hazel M.
    Godfrey, Keith M.
    Roberts, Graham
    Holloway, John W.
    [J]. EUROPEAN RESPIRATORY JOURNAL, 2013, 41 (03) : 756 - 757
  • [7] DNA methylation in tumor and matched normal tissues from non-small cell lung cancer patients
    Feng, Qinghua
    Hawes, Stephen E.
    Stern, Joshua E.
    Wiens, Linda
    Lu, Hiep
    Dong, Zhao Ming
    Jordanj, C. Diana
    Kiviatl, Nancy B.
    Vesselle, Hubert
    [J]. CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION, 2008, 17 (03) : 645 - 654
  • [8] Role of Genetic Polymorphisms in IL12Rβ2 in Chronic Obstructive Pulmonary Disease
    Fu, Yihui
    Liu, Lirong
    Wu, Haihong
    [J]. INTERNATIONAL JOURNAL OF CHRONIC OBSTRUCTIVE PULMONARY DISEASE, 2022, 17 : 1671 - 1683
  • [9] A Between Ethnicities Comparison of Chronic Obstructive Pulmonary Disease Genetic Risk
    Gim, Jungsoo
    An, Jaehoon
    Sung, Joohon
    Silverman, Edwin K.
    Cho, Michael H.
    Won, Sungho
    [J]. FRONTIERS IN GENETICS, 2020, 11
  • [10] Pharmacogenomics of chronic obstructive pulmonary disease
    Hersh, Craig P.
    [J]. EXPERT REVIEW OF RESPIRATORY MEDICINE, 2019, 13 (05) : 459 - 470