Identification of genetic loci associated with protein and fiber digestibility in alfalfa (Medicago sativa L.)

被引:0
作者
Lin, Sen [1 ]
Medina, Cesar Augusto [2 ]
Patel, Smit Bipinchandra [3 ]
Xu, Zhanyou [2 ]
Zanton, Geoffrey I. [4 ]
Combs, David [5 ]
Wang, Guojie [6 ]
Shewmaker, Glenn [7 ]
Fransen, Steve [8 ]
Llewellyn, Don [3 ]
Norberg, Steven [9 ]
Yu, Long-Xi [1 ]
机构
[1] ARS, USDA, Plant Germplasm Intro Testing & Res, North Bunn Rd, Prosser, WA 24016 USA
[2] ARS, USDA, Plant Sci Res Unit, St Paul, MN USA
[3] Washington State Univ, Dept Biol Syst Engn, Pullman, WA USA
[4] ARS, USDA, Dairy Forage Res Ctr, Madison, WI USA
[5] Univ Wisconsin, Dept Anim & Dairy Sci, Madison, WI USA
[6] Penn State Univ, Dept Plant Sci, University Pk, PA USA
[7] Univ Idaho, Kimberly R&E Ctr, Kimberly, ID USA
[8] Washington State Univ, Irrigated Agr Res & Extens Ctr, Prosser, WA USA
[9] Washington State Univ, Franklin Cty Extens, Pasco, WA USA
基金
美国食品与农业研究所;
关键词
RUMINAL UNDEGRADABLE PROTEINS; CORN-SILAGE; DEGRADATION; ARABIDOPSIS; KEY; DEHYDROGENASE; PROPORTIONS; REGULATOR; SEQUENCE; SYSTEM;
D O I
10.1002/csc2.70004
中图分类号
S3 [农学(农艺学)];
学科分类号
0901 ;
摘要
Alfalfa (Medicago sativa L.), known as the queen of forages, is a versatile and valuable forage crop that holds significant importance in agriculture due to its myriad benefits for livestock. Ruminants benefit from alfalfa's digestible fiber and protein, contributing to improved feed efficiency and milk production. However, alfalfa protein is rapidly and extensively degraded in rumen, and it is a challenge to maximize the efficiency of the forage crude protein utilized as metabolizable protein by ruminant livestock. In this study, the phenotypic data of 14 traits related to forage digestibility were collected from 200 alfalfa accessions planted at three different locations for 2 years. The performance of these accessions showed dramatic variations by location, indicating that environmental factors play important roles in alfalfa digestibility. Twenty-two significant genetic markers associated with 12 traits related to forage digestibility were identified by genome-wide association study. Among them, seven markers were associated with more than one trait, although the significant markers varied by year and location. Putative candidate genes associated with these loci were also identified. The digestibility-related markers and associated genes identified in this study will help to better understand the genetic basis of forage digestibility and its interaction with environments. After validation, the closely linked markers and associated genes can be used for marker-assisted selection of alfalfa with improved forage quality.
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页数:13
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共 54 条
  • [1] Alkhalfioui F., Renard M., Vensel W.H., Wong J., Tanaka C.K., Hurkman W.J., Buchanan B.B., Montrichard F., Thioredoxin-linked proteins are reduced during germination of Medicago truncatula seeds, Plant Physiology, 144, pp. 1559-1579, (2007)
  • [2] Ancin M., Fernandez-Irigoyen J., Santamaria E., Larraya L., Fernandez-San Millan A., Veramendi J., Farran I., New in vivo approach to broaden the thioredoxin family interactome in chloroplasts, Antioxidants, 11, (2022)
  • [3] Arndt C., Powell J.M., Aguerre M.J., Wattiaux M.A., Performance, digestion, nitrogen balance, and emission of manure ammonia, enteric methane, and carbon dioxide in lactating cows fed diets with varying alfalfa silage-to-corn silage ratios, Journal of Dairy Science, 98, pp. 418-430, (2015)
  • [4] Ayaydin F., Vissi E., Meszaros T., Miskolczi P., Kovacs I., Feher A., Dombradi V., Erdodi F., Gergely P., Dudits D., Inhibition of serine/threonine-specific protein phosphatases causes premature activation of cdc2MsF kinase at G2/M transition and early mitotic microtubule organisation in alfalfa, The Plant Journal, 23, pp. 85-96, (2000)
  • [5] Bateman A., UniProt: a worldwide hub of protein knowledge, Nucleic Acids Research, 47, pp. D506-D515, (2019)
  • [6] Bhattarai S., Fu Y.-B., Coulman B., Tanino K., Karunakaran C., Biligetu B., Transcriptomic analysis of differentially expressed genes in leaves and roots of two alfalfa (Medicago sativa L.) cultivars with different salt tolerance, BMC Plant Biology, 21, pp. 1-16, (2021)
  • [7] Biazzi E., Nazzicari N., Pecetti L., Brummer E.C., Palmonari A., Tava A., Annicchiarico P., Genome-wide association mapping and genomic selection for alfalfa (Medicago sativa) forage quality traits, PLoS One, 12, (2017)
  • [8] Brito A.F., Broderick G.A., Effect of varying dietary ratios of alfalfa silage to corn silage on production and nitrogen utilization in lactating dairy cows, Journal of Dairy Science, 89, pp. 3924-3938, (2006)
  • [9] Broderick G.A., Determination of protein degradation rates using a rumen in vitro system containing inhibitors of microbial nitrogen metabolism, British Journal of Nutrition, 58, pp. 463-475, (1987)
  • [10] Broderick G.A., Review: Optimizing ruminant conversion of feed protein to human food protein, Animal, 12, pp. 1722-1734, (2018)