Characterization of DsrD and its interaction with the DsrAB dissimilatory sulfite reductase

被引:0
|
作者
Barbosa, Ana C. C. [1 ]
Venceslau, Sofia S. [1 ]
Ferreira, Delfim [1 ]
Neukirchen, Sinje [2 ]
Sousa, Filipa L. [2 ]
Melo, Manuel N. [1 ]
Pereira, Ines A. C. [1 ]
机构
[1] Univ Nova Lisboa, Inst Tecnol Quim & Biol Antonio Xavier, P-2780156 Oeiras, Portugal
[2] Univ Vienna, Dept Funct & Evolutionary Ecol, Genome Evolut & Ecol Grp, Vienna, Austria
基金
欧洲研究理事会;
关键词
dissimilatory sulfite reductase; DsrAB; DsrD; sulfate-reducing bacteria; sulfur metabolism; MOLECULAR-DYNAMICS; ELECTRON-TRANSFER; CRYSTAL-STRUCTURE; FORCE-FIELD; SULFATE; PROTEIN; DIVERSITY; TRANSITIONS; INSIGHTS; MARTINI;
D O I
10.1002/pro.5222
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Microbial dissimilatory sulfate reduction is a key process in the global sulfur and carbon cycles in anoxic ecosystems. In this anaerobic respiration, sulfate is phosphorylated and reduced to sulfite, which is further reduced to a DsrC-trisulfide by the dissimilatory sulfite reductase DsrAB. DsrD is a small protein that acts as an allosteric activator of DsrAB, increasing the efficiency of sulfite reduction. Here, we report a detailed study of DsrD and its interaction with DsrAB. Sequence similarity analyses show that there are three groups of DsrD in organisms with a reductive-type DsrAB. The protein regions involved in the DsrD-DsrAB interaction and activity-promoting effect were investigated through in vitro and in silico studies, including mutations of conserved DsrD residues. The results reveal that the conserved beta-loop of DsrD is involved in the interaction, contributing to a better understanding of its mechanism of action.
引用
收藏
页数:16
相关论文
共 50 条
  • [21] Isolation and characterization of a gene for assimilatory sulfite reductase from Arabidopsis thaliana
    Bork, C
    Schwenn, JD
    Hell, R
    GENE, 1998, 212 (01) : 147 - 153
  • [22] Structural and biochemical characterization of EDTA monooxygenase and its physical interaction with a partner flavin reductase
    Jun, Se-Young
    Lewis, Kevin M.
    Youn, Buhyun
    Xun, Luying
    Kang, ChulHee
    MOLECULAR MICROBIOLOGY, 2016, 100 (06) : 989 - 1003
  • [23] Superoxide Reductase: Different Interaction Modes with its Two Redox Partners
    Almeida, Rui M.
    Turano, Paola
    Moura, Isabel
    Moura, Jose J. G.
    Pauleta, Sofia R.
    CHEMBIOCHEM, 2013, 14 (14) : 1858 - 1866
  • [24] Structural characterization of Giardia duodenalis thioredoxin reductase (gTrxR) and computational analysis of its interaction with NBDHEX
    Brogi, Simone
    Fiorillo, Annarita
    Chemi, Giulia
    Butini, Stefania
    Lalle, Marco
    Ilari, Andrea
    Gemma, Sandra
    Campiani, Giuseppe
    EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 2017, 135 : 479 - 490
  • [25] Dissimilatory sulfite reductase revisited - The desulfoviridin molecule does contain 20 iron ions, extensively demetallated sirohaem, and an S=9/2 iron-sulfur cluster
    Marritt, SJ
    Hagen, WR
    EUROPEAN JOURNAL OF BIOCHEMISTRY, 1996, 238 (03): : 724 - 727
  • [26] Characterization of a periplasmic nitrate reductase in complex with its biosynthetic chaperone
    Dow, Jennifer M.
    Grahl, Sabine
    Ward, Richard
    Evans, Rachael
    Byron, Olwyn
    Norman, David G.
    Palmer, Tracy
    Sargent, Frank
    FEBS JOURNAL, 2014, 281 (01) : 246 - 260
  • [27] Interaction of Ferredoxin–NADP+ Reductase with its Substrates: Optimal Interaction for Efficient Electron Transfer
    Milagros Medina
    Carlos Gómez-Moreno
    Photosynthesis Research, 2004, 79 : 113 - 131
  • [28] Interaction of ferredoxin-NADP+ reductase with its substrates:: optimal interaction for efficient electron transfer
    Medina, M
    Gómez-Moreno, C
    PHOTOSYNTHESIS RESEARCH, 2004, 79 (02) : 113 - 131
  • [29] The CDR3 region as the major driver of TREM-1 interaction with its ligands, an in silico characterization
    Matos, Amanda de Oliveira
    Dantas, Pedro Henrique dos Santos
    Colmenares, Mike Telemaco Contreras
    Sartori, Geraldo Rodrigues
    Silva-Sales, Marcelle
    Da Silva, Joao Herminio Martins
    Neves, Bruno Junior
    Andrade, Carolina Horta
    Sales-Campos, Helioswilton
    COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2023, 21 : 2579 - 2590
  • [30] SEROHEME SULFITE REDUCTASE ISOLATED FROM CHROMATIUM-VINOSUM - PURIFICATION AND INVESTIGATION OF SOME OF ITS MOLECULAR AND CATALYTIC PROPERTIES
    SCHEDEL, M
    VANSELOW, M
    TRUPER, HG
    ARCHIVES OF MICROBIOLOGY, 1979, 121 (01) : 29 - 36