Ctenophores employ flexible rows of appendages called ctenes that form the metachronal beating pattern. A complete cycle of such paddling consists of a power stroke that strokes backward to produce propulsion and a recovery stroke that allows the appendage to recover its initial position. Effective locomotion in these creatures relies on maximizing propulsion during the power stroke while minimizing drag in the recovery stroke. Unlike rigid oars, the ctenes are flexible during both the power stroke and the recovery stroke, and notably, their strokes are asymmetric, with faster movement during the power stroke. As previous research assumed uniform material properties. This assumption will eventually make the ctene deform more intensively in the power stroke than the recovery stroke due to the asymmetrical hydrodynamic forces. However, observations contradict these assumptions. One explanation posits that ctenes stiffen during the power stroke, enhancing their propulsive force, and become more flexible in the recovery stroke, reducing drag by minimizing the water-countering area. This study focusses on the influence of asymmetric stiffness on their propulsion mechanism. Inspired by nature, we conducted three-dimensional fluid-structure interaction (FSI) using an inhouse immersed-boundary-method-based flow solver integrated with a nonlinear finite-element solid-mechanics solver. This integrated solver uses a two-way coupling that ensures a higher accuracy regarding the complexity due to the involvement of the multiple ctenes in a ctene row. The preliminary results show that the anisotropic stiffness of the ctene have better accuracy of deformation as compared to the deformation recorded by the high-speed camera. The asymmetric properties of the ctene material allow both the spatial and temporal asymmetry of the ctene beating pattern. Our investigation suggests that while symmetrical beating can only generate negative net thrust, a slightly asymmetrical beating can make the thrust positive. We find that power stroke period that cost 30% whole period can generates the highest thrust. As multiple ctenes involves, the interaction among ctenes can amplified the effects of the asymmetrical beating, so that the thrust generation is enhanced by 9 to 13 times because of it.