Enzyme cascade to enzyme complex phase-transition-like transformation studied by the maximum entropy production principle

被引:0
|
作者
Dobovisek, Andrej [1 ,2 ]
Blazevic, Tina [1 ]
Kralj, Samo [1 ,3 ]
Fajmut, Ales [1 ,4 ]
机构
[1] Univ Maribor, Fac Nat Sci & Math, Koroskacesta 160, Maribor 2000, Slovenia
[2] Univ Maribor, Fac Med, Taborska ul 8, Maribor 2000, Slovenia
[3] Jozef Stefan Inst, Jamova cesta 39, Ljubljana 1000, Slovenia
[4] Univ Maribor, Fac Hlth Sci, Zitna ul 15, Maribor 2000, Slovenia
来源
CELL REPORTS PHYSICAL SCIENCE | 2025年 / 6卷 / 02期
关键词
METABOLON FORMATION; THERMODYNAMICS; EVOLUTION; EFFICIENCY; NETWORKS; PATHWAYS; GRANULES; SYSTEMS; DESIGN; STATES;
D O I
10.1016/j.xcrp.2024.102400
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
In biological cells, soluble enzymes often spontaneously reorganize into higher-order complexes called metabolons, providing regulatory advantages over individual soluble enzymes under specific conditions. Despite their importance, the mechanisms underlying metabolon formation remain unclear. Here we report a theoretical model that elucidates the spontaneous transition between soluble enzyme cascades and complexes, driven by fluctuations in intermediate metabolite concentrations. The model integrates the maximum entropy production principle (MEPP) and the Shannon information entropy (MaxEnt), Landau phase-transition theory, kinetic modeling, stability analysis, and metabolic control analysis. Our results show that soluble enzymes and enzyme complexes represent two distinct catalytic states with unique kinetic and regulatory properties. The transition from an enzyme cascade to an enzyme complex displays features of a first-order phase transition, highlighting the system's tendency to reorganize into its most thermodynamically favorable state, providing a potential pathway for metabolic regulation.
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页数:12
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