A novel necroptosis-related genes signature to predict prognosis and treatment response in bladder cancer

被引:0
作者
Yao, Dongnuan [1 ,2 ,3 ,4 ]
Yu, Weitao [1 ,2 ,3 ,4 ]
Ma, Xueming [1 ,2 ,3 ,4 ]
Tian, Junqiang [1 ,2 ,3 ,4 ]
机构
[1] Lanzhou Univ, Dept Urol, Hosp 2, Lanzhou, Peoples R China
[2] Lanzhou Univ, Gansu Prov Clin Res Ctr Urinary Syst Dis, Hosp 2, Lanzhou, Peoples R China
[3] Lanzhou Univ, Hosp 2, Lanzhou, Peoples R China
[4] Lanzhou Univ, Clin Med Sch, Lanzhou, Peoples R China
关键词
BLCA; necroptosis; tumor microenvironment (TME); prognostic model; treatment response; MIXED LINEAGE KINASE;
D O I
10.3389/fmolb.2024.1493411
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Background Necroptosis, a form of programmed inflammatory cell death, plays a crucial role in tumor development, necrosis, metastasis, and immune response. This study aimed to explore the role of necroptosis in BLCA and construct a new prognostic model to guide clinical treatment and predict individualized treatment response.Methods The transcriptome profiling and the corresponding clinical data of BLCA patients were obtained from the Cancer Genome Atlas database (TCGA) and GEO databases. Univariate, multivariate and LASSO Cox regression analyses were used to identify and construct prognostic features associated with necroptosis. We constructed and validated a prognostic model associated with the patient's overall survival (OS). A nomogram was established to predict the survival rates of BLCA patients. Finally, the correlation between risk scores and tumor immune microenvironment, somatic mutations, immunotherapy, and chemotherapy was comprehensively analyzed.Results The study found two distinct NRG clusters and three gene subtypes, with significant differences in pathway enrichment and immune cell infiltration associated with different NRG clusters in the TME. In addition, we screened out six necroptosis prognosis-related genes (including PPP2R3A; CERCAM; PIK3IP1; CNTN1; CES1 and CD96) to construct a risk score prognostic model. Significant differences in overall survival rate, immune cell infiltration status, and somatic mutations existed between the high and low-risk scores in BLCA patients. Finally, drug sensitivity analysis showed that high-risk patients benefited more from immunotherapy and chemotherapy drugs.Conclusion This study explores the importance of necroptosis in the prognosis of patients with BLCA, and the prognostic features associated with necroptosis that we identified can serve as new biomarkers to help develop more precise treatment strategies.
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页数:13
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