Gastroesophageal reflux disease increases predisposition to severe COVID-19: Insights from integrated Mendelian randomization and genetic analysis

被引:0
作者
Pan, Jingjing [1 ,2 ]
Li, Jianhua [1 ,2 ]
机构
[1] Zhejiang Prov Ctr Dis Control & Prevent, Dept Microbiol, Hangzhou, Peoples R China
[2] Zhejiang Key Lab Publ Hlth Detect & Pathogenesis R, Hangzhou, Peoples R China
关键词
colocalization analysis; COVID-19; gastroesophageal reflux disease; Mendelian randomization; molecular pathway analysis; shared genomic loci; RISK;
D O I
10.1111/ahg.12584
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
ObjectiveThis study aims to investigate the potential causal relationship, shared genomic loci, as well as potential molecular pathways and tissue-specific expression patterns between gastroesophageal reflux disease (GERD) and the risk of hospitalized/severe 2019 coronavirus disease (COVID-19).MethodsWe employed linkage disequilibrium score regression and bidirectional Mendelian randomization (MR) analysis to explore potential genetic associations between GERD (N = 602,604) and hospitalized COVID-19 (N = 2095,324) as well as severe COVID-19 (N = 1086,211). Additionally, shared genomic loci were extracted from common pivotal regions, further confirmed through corresponding colocalization analyses. GERD-driven molecular pathway network was constructed using extensive literature data mining to understand the molecular-level impacts of GERD on COVID-19.ResultsOur results revealed a significant positive genetic correlation between GERD and both hospitalized (rg = 0.418) and severe COVID-19 (rg = 0.314). Furthermore, the MR analysis demonstrated a unidirectional causal effect of genetic predisposition to GERD on COVID-19 outcomes, including hospitalized COVID-19 (odds ratio [OR]: 1.33, 95% confidence interval [CI]: 1.27-1.44, p = 9.17e - 12) and severe COVID-19 (OR: 1.27, 95% CI: 1.18-1.37, p = 1.20e - 05). Additionally, GERD and both COVID-19 conditions shared one genomic locus with lead-SNPs rs1011407 and rs1123573, corresponding to the transcription factor BCL11A. Colocalization analysis further demonstrated a significant positive correlation between genome-wide association study and expression quantitative trait locus (eQTL) abnormalities, including rs1011407 (eQTL_p = 2.35e - 07) and rs1123573 (eQTL_p = 2.74e - 05). Molecular pathway analysis indicated that GERD might promote the progression of COVID-19 by inducting immune-activated and inflammation-related pathways.ConclusionThese findings confirm that genetically determined GERD may increase the susceptibility to hospitalized/severe COVID-19. The shared genetic loci and the potential molecular pathways offer valuable insights into causal connections between GERD and COVID-19.
引用
收藏
页码:54 / 65
页数:12
相关论文
共 45 条
[31]   Gastroesophageal reflux disease-associated esophagitis induces endogenous cytokine production leading to motor abnormalities [J].
Rieder, Florian ;
Cheng, Ling ;
Harnett, Karen M. ;
Chak, Amitabh ;
Cooper, Gregory S. ;
Isenberg, Gerard ;
Ray, Monica ;
Katz, Jeffry A. ;
Catanzaro, Andrew ;
O'Shea, Robert ;
Post, Anthony B. ;
Wong, Richard ;
Sivak, Michael V. ;
McCormick, Thomas ;
Phillips, Manijeh ;
West, Gail A. ;
Willis, Joseph E. ;
Biancani, Piero ;
Fiocchi, Claudio .
GASTROENTEROLOGY, 2007, 132 (01) :154-165
[32]   Genetic polymorphisms of ACE1, ACE2, and TMPRSS2 associated with COVID-19 severity: A systematic review with meta-analysis [J].
Saengsiwaritt, Wacharapol ;
Jittikoon, Jiraphun ;
Chaikledkaew, Usa ;
Udomsinprasert, Wanvisa .
REVIEWS IN MEDICAL VIROLOGY, 2022, 32 (04)
[33]   Contributions of human ACE2 and TMPRSS2 in determining host-pathogen interaction of COVID-19 [J].
Senapati, Sabyasachi ;
Banerjee, Pratibha ;
Bhagavatula, Sandilya ;
Kushwaha, Prem Prakash ;
Kumar, Shashank .
JOURNAL OF GENETICS, 2021, 100 (01)
[34]   Cytoscape: A software environment for integrated models of biomolecular interaction networks [J].
Shannon, P ;
Markiel, A ;
Ozier, O ;
Baliga, NS ;
Wang, JT ;
Ramage, D ;
Amin, N ;
Schwikowski, B ;
Ideker, T .
GENOME RESEARCH, 2003, 13 (11) :2498-2504
[35]  
Szklarczyk D, 2019, NUCLEIC ACIDS RES, V47, pD607, DOI [10.1093/nar/gky1131, 10.1093/nar/gkac1000]
[36]   Insights to SARS-CoV-2 life cycle, pathophysiology, and rationalized treatments that target COVID-19 clinical complications [J].
Trougakos, Ioannis P. ;
Stamatelopoulos, Kimon ;
Terpos, Evangelos ;
Tsitsilonis, Ourania E. ;
Aivalioti, Evmorfia ;
Paraskevis, Dimitrios ;
Kastritis, Efstathios ;
Pavlakis, George N. ;
Dimopoulos, Meletios A. .
JOURNAL OF BIOMEDICAL SCIENCE, 2021, 28 (01)
[37]   Self-medication in hospitalized patients with COVID-19: A cross-sectional study in northern Peru [J].
Vasquez-Elera, Luis E. ;
Failoc-Rojas, Virgilio E. ;
Martinez-Rivera, Raisa N. ;
Morocho-Alburqueque, Noelia ;
Temoche-Rivas, Mario S. ;
Valladares-Garrido, Mario J. .
GERMS, 2022, 12 (01) :46-53
[38]   Detection of widespread horizontal pleiotropy in causal relationships inferred from Mendelian randomization between complex traits and diseases [J].
Verbanck, Marie ;
Chen, Chia-Yen ;
Neale, Benjamin ;
Do, Ron .
NATURE GENETICS, 2018, 50 (05) :693-+
[39]   A simple new approach to variable selection in regression, with application to genetic fine mapping [J].
Wang, Gao ;
Sarkar, Abhishek ;
Carbonetto, Peter ;
Stephens, Matthew .
JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY, 2020, 82 (05) :1273-1300
[40]   Functional mapping and annotation of genetic associations with FUMA [J].
Watanabe, Kyoko ;
Taskesen, Erdogan ;
van Bochoven, Arjen ;
Posthuma, Danielle .
NATURE COMMUNICATIONS, 2017, 8