Carbohydrate-Binding Mechanism of the Coagulant Lectin from Moringa oleifera Seeds (cMoL) Is Related to the Dimeric Protein Structure

被引:0
作者
de Barros, Matheus Cavalcanti [1 ]
de Oliveira, Ana Patricia Silva [1 ]
dos Santos, Franciane Goncalves [2 ]
Silva, Fabiana Aparecida Cavalcante [3 ]
Menezes, Thais Meira [2 ]
Seabra, Gustavo de Miranda [4 ]
Yoneda, Juliana Sakamoto [5 ]
Coelho, Luana Cassandra Breitenbach Barroso [1 ]
Macedo, Maria Ligia Rodrigues [6 ]
Napoleao, Thiago Henrique [1 ]
Lima, Thamarah de Albuquerque [1 ]
Neves, Jorge Luiz [2 ]
Paiva, Patricia Maria Guedes [1 ]
机构
[1] Univ Fed Pernambuco, Dept Bioquim, BR-50670901 Recife, PE, Brazil
[2] Univ Fed Pernambuco, Dept Quim Fundamental, BR-50670901 Recife, PE, Brazil
[3] Ctr Tecnol Estrateg Nordeste, BR-50740545 Recife, PE, Brazil
[4] Univ Florida, Coll Pharm, Ctr Nat Prod Drug Discovery & Dev, Dept Med Chem, Gainseville, FL 32611 USA
[5] Ctr Nacl Pesquisa Energia & Mat, Lab Nacl Luz Sincrotron, BR-13083100 Campinas, SP, Brazil
[6] Univ Fed Mato Grosso, Fac Ciencias Farmaceut Alimentos & Nutr 22, Dept Tecnol Alimentos & Saude, BR-79070900 Campo Grande, MS, Brazil
关键词
glucose-binding lectin; protein-sugar interaction; drumstick tree; MOLECULAR DOCKING; CRYSTAL-STRUCTURE; BIOSENSORS; ALBUMIN; TOOL;
D O I
10.3390/molecules29194615
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
This study characterized the binding mechanisms of the lectin cMoL (from Moringa oleifera seeds) to carbohydrates using spectroscopy and molecular dynamics (MD). The interaction with carbohydrates was studied by evaluating lectin fluorescence emission after titration with glucose or galactose (2.0-11 mM). The Stern-Volmer constant (Ksv), binding constant (Ka), Gibbs free energy (Delta G), and Hill coefficient were calculated. After the urea-induced denaturation of cMoL, evaluations were performed using fluorescence spectroscopy, circular dichroism (CD), and hemagglutinating activity (HA) evaluations. The MD simulations were performed using the Amber 20 package. The decrease in Ksv revealed that cMoL interacts with carbohydrates via a static mechanism. The cMoL bound carbohydrates spontaneously (Delta G < 0) and presented a Ka on the order of 10(2), with high selectivity for glucose. Protein-ligand complexes were stabilized by hydrogen bonds and hydrophobic interactions. The Hill parameter (h similar to 2) indicated that the binding occurs through the cMoL dimer. The loss of HA at urea concentrations at which the fluorescence and CD spectra indicated protein monomerization confirmed these results. The MD simulations revealed that glucose bound to the large cavity formed between the monomers. In conclusion, the biotechnological application of cMoL lectin requires specific methods or media to improve its dimeric protein structure.
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页数:14
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共 59 条
[1]   Effect of Moringa oleifera lectins on survival and enzyme activities of Aedes aegypti larvae susceptible and resistant to organophosphate [J].
Agra-Neto, Afonso Cordeiro ;
Napoleao, Thiago Henrique ;
Pontual, Emmanuel Viana ;
de Lima Santos, Nataly Diniz ;
Luz, Luciana de Andrade ;
Fontes de Oliveira, Claudia Maria ;
Varjal de Melo-Santos, Maria Alice ;
Breitenbach Barroso Coelho, Luana Cassandra ;
do Amaral Ferraz Navarro, Daniela Maria ;
Guedes Paiva, Patricia Maria .
PARASITOLOGY RESEARCH, 2014, 113 (01) :175-184
[2]   Protein fractionation of seeds of Moringa oleifera lam and its application in superficial water treatment [J].
Alves Baptista, Aline Takaoka ;
Silva, Mariana Oliveira ;
Gomes, Raquel Guttierres ;
Bergamasco, Rosangela ;
Vieira, Marcelo Fernandes ;
Salcedo Vieira, Angelica Marquetotti .
SEPARATION AND PURIFICATION TECHNOLOGY, 2017, 180 :114-124
[3]   Structural analysis, molecular docking and molecular dynamics of an edematogenic lectin from Centrolobium microchaete seeds [J].
Bastos Neco, Antonio Hadson ;
Pinto-Junior, Vanir Reis ;
Araripe, David Alencar ;
Santiago, Mayara Queiroz ;
Silva Osterne, Vinicius Jose ;
Lossio, Claudia Figueiredo ;
Simplicio Nobre, Clareane Avelino ;
Oliveira, Messias Vital ;
Lima Silva, Mayara Torquato ;
Queiroz Martins, Maria Gleiciane ;
Cajazeiras, Joao Batista ;
Oliveira Marques, Gabriela Fernandes ;
Costa, Diego Rabelo ;
Nascimento, Kyria Santiago ;
Sampaio Assreuy, Ana Maria ;
Cavada, Benildo Sousa .
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2018, 117 :124-133
[4]  
Bose Partha Pratim, 2016, Biochem Biophys Rep, V6, P242, DOI 10.1016/j.bbrep.2016.05.001
[5]  
Case D.A., 2021, AMBER 2017
[6]   Denaturant-induced equilibrium unfolding of concanavalin A is expressed by a three-state mechanism and provides an estimate of its protein stability [J].
Chatterjee, A ;
Mandal, DK .
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS, 2003, 1648 (1-2) :174-183
[7]   Evaluation of Cytotoxic and Anti-Inflammatory Activities of Extracts and Lectins from Moringa oleifera Seeds [J].
Correa Araujo, Larissa Cardoso ;
Aguiar, Jaciana Santos ;
Napoleao, Thiago Henrique ;
Barreto Mota, Fernanda Virginia ;
Souza Barros, Andre Luiz ;
Moura, Maiara Celine ;
Coriolano, Marilia Cavalcanti ;
Breitenbach Barroso Coelho, Luana Cassandra ;
Silva, Teresinha Goncalves ;
Guedes Paiva, Patricia Maria .
PLOS ONE, 2013, 8 (12)
[8]   Negative cooperativity associated with binding of multivalent carbohydrates to lectins. thermodynamic analysis of the "multivalency effect" [J].
Dam, TK ;
Roy, R ;
Pagé, D ;
Brewer, CF .
BIOCHEMISTRY, 2002, 41 (04) :1351-1358
[9]   Electrochemical Characterization Using Biosensors with the Coagulant Moringa oleifera Seed Lectin (cMoL) [J].
de Oliveira, Benny Ferreira ;
de Araujo, Hallysson Douglas Andrade ;
Neves, Eloisa Ferreira ;
Napoleao, Thiago Henrique ;
Paiva, Patricia Maria Guedes ;
de Freitas, Katia Cristina Silva ;
de Souza, Sandra Rodrigues ;
Coelho, Luana Cassandra Breitenbach Barroso .
BIOSENSORS-BASEL, 2023, 13 (06)
[10]   Structure of a lectin from Canavalia gladiata seeds:: new structural insights for old molecules [J].
Delatorre, Plinio ;
Rocha, Bruno A. M. ;
Souza, Emmanuel P. ;
Oliveira, Taiana M. ;
Bezerra, Gustavo A. ;
Moreno, Frederico B. M. B. ;
Freitas, Beatriz T. ;
Santi-Gadelha, Tatiane ;
Sampaio, Alexandre H. ;
Azevedo, Walter F., Jr. ;
Cavada, Benildo S. .
BMC STRUCTURAL BIOLOGY, 2007, 7