Development of molecular markers for distinguishing between the edible plant Petasites japonicus and the toxic plant Farfugium japonicum using quantitative real-time polymerase chain reaction

被引:0
|
作者
Kim, Cheol Min [1 ]
Jang, Cheol Seong [1 ]
机构
[1] Kangwon Natl Univ, Interdisciplinary Program Smart Agr, Plant Genom Lab, Chunchon 24341, South Korea
关键词
DNA markers; Farfugium japonicum; Petasites japonicas; SYBR Green real-time PCR; Toxic plants; PCR; DNA; VALIDATION; FOOD; DYE;
D O I
10.1007/s10068-025-01874-3
中图分类号
TS2 [食品工业];
学科分类号
0832 ;
摘要
The consumption of wild plants, raw or cooked, is a common practice across many countries. However, some wild plants have toxins harmful to humans. In this study, we developed specific primer targeting chloroplast genes to distinguish the edible plant, Petasites japonicus, and the toxic plant, Farfugium japonicum. The performance of the designed primers was evaluated through a qPCR assay, assessing their specificity, sensitivity, and practical applicability. Six primer (three each for P. japonicus and F. japonicum) demonstrated linearity with correlation coefficients above 0.99 and slopes ranging from - 3.337 to - 3.581. PCR efficiencies were calculated to range from 90.28 to 97.86%, with a detection limit of 0.001 ng of DNA, and a quantitative threshold of 0.1% (w/w). The specificity was confirmed with 13 non-target plant species, and efficiency validated using 15 commercial samples. The assay help prevent mistaking toxic wild plants and provide guidelines to identify toxic plants for public safety.
引用
收藏
页码:2553 / 2562
页数:10
相关论文
共 50 条
  • [1] Interaction dynamics between endophytic biocontrol agents and pathogen in the host plant studied via quantitative real-time polymerase chain reaction (qPCR) approach
    Chow, Yiing Yng
    Rahman, Sadequr
    Ting, Adeline Su Yien
    BIOLOGICAL CONTROL, 2018, 125 : 44 - 49
  • [2] Development of a novel real-time polymerase chain reaction assay for the sensitive detection of Schistosoma japonicum in human stool
    Halili, Sara
    Grant, Jessica R.
    Pilotte, Nils
    Gordon, Catherine A.
    Williams, Steven A.
    PLOS NEGLECTED TROPICAL DISEASES, 2021, 15 (10):
  • [3] Development of multiplexed real-time quantitative polymerase chain reaction assay for detecting human adenoviruses
    Huang, Meei-Li
    Nguy, Long
    Ferrenberg, James
    Boeckh, Michael
    Cent, Anne
    Corey, Lawrence
    DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE, 2008, 62 (03) : 263 - 271
  • [4] Development of quantitative real-time polymerase chain reaction for detection of and discrimination between Erysipelothrix rhusiopathiae and other Erysipelothrix species
    To, Ho
    Koyama, Tomohiro
    Nagai, Shinya
    Tuchiya, Kotaro
    Nunoya, Tetsuo
    JOURNAL OF VETERINARY DIAGNOSTIC INVESTIGATION, 2009, 21 (05) : 701 - 706
  • [5] Ultrafast and Real-Time Nanoplasmonic On- Chip Polymerase Chain Reaction for Rapid and Quantitative Molecular Diagnostics
    Kang, Byoung-Hoon
    Lee, Youngseop
    Yu, Eun-Sil
    Na, Hamin
    Kang, Minhee
    Huh, Hee Jae
    Jeong, Ki-Hun
    ACS NANO, 2021, 15 (06) : 10194 - 10202
  • [6] Development of a real-time quantitative polymerase chain reaction assay for the detection of congenital human cytomegalovirus infection in urine samples
    Ligozzi, Marco
    Poggi, Mara
    Saletti, Marilena
    Gibellini, Davide
    MOLECULAR AND CELLULAR PROBES, 2016, 30 (01) : 50 - 52
  • [7] Development of a fluorescent quantitative real-time polymerase chain reaction assay for the detection of Goose parvovirus in vivo
    Yang, Jin-Long
    Cheng, An-Chun
    Wang, Ming-Shu
    Pan, Kang-Cheng
    Li, Min
    Guo, Yu-Fei
    Li, Chuan-Feng
    Zhu, De-Kang
    Chen, Xiao-Yue
    VIROLOGY JOURNAL, 2009, 6
  • [8] Comparison of two real-time quantitative polymerase chain reaction strategies for minimal residual disease evaluation in lymphoproliferative disorders: correlation between immunoglobulin gene mutation load and real-time quantitative polymerase chain reaction performance
    Della Starza, Irene
    Cavalli, Marzia
    Del Giudice, Ilaria
    Barbero, Daniela
    Mantoan, Barbara
    Genuardi, Elisa
    Urbano, Marina
    Mannu, Claudia
    Gazzola, Anna
    Ciabatti, Elena
    Guarini, Anna
    Foa, Robin
    Galimberti, Sara
    Piccaluga, Pierpaolo
    Gaidano, Gianluca
    Ladetto, Marco
    Monitillo, Luigia
    HEMATOLOGICAL ONCOLOGY, 2014, 32 (03) : 133 - 138
  • [9] Quantitative detection of Proteus species by real-time polymerase chain reaction using SYBR Green I
    Bi, Shui-lian
    Tang, Shu-ze
    Wu, Xi-yang
    Chen, Shou-yi
    ANNALS OF MICROBIOLOGY, 2013, 63 (03) : 1205 - 1208
  • [10] Fetal gender determination using real-time quantitative polymerase chain reaction analysis of maternal plasma
    Hwa, HL
    Ko, TM
    Yen, ML
    Chiang, YL
    JOURNAL OF THE FORMOSAN MEDICAL ASSOCIATION, 2004, 103 (05) : 364 - 368