Phosphorus Metabolism-Related Genes Serve as Novel Biomarkers for Predicting Prognosis in Bladder Cancer: A Bioinformatics Analysis

被引:0
|
作者
He, Yang [1 ,2 ]
Xu, Abai [1 ,2 ]
Xiao, Li [3 ,4 ]
Yang, Ying [5 ]
Li, Boping [2 ]
Liu, Zhe [2 ]
Rao, Peng [2 ]
Wang, Yicheng [2 ]
Ruan, Li [1 ]
Zhang, Tao [1 ]
机构
[1] Jinan Univ, Guangzhou Red Cross Hosp, Dept Urol, Guangzhou, Peoples R China
[2] Southern Med Univ, Zhujiang Hosp, Dept Urol, Guangzhou, Peoples R China
[3] Canc Hosp, Chinese Acad Med Sci & Peking Union Med Coll, Dept Med Oncol, Natl Canc Ctr,Nat Clin Res Ctr Canc, Shenzhen, Peoples R China
[4] Shenzhen Hosp, Chinese Acad Med Sci & Peking Union Med Coll, Shenzhen, Peoples R China
[5] Jinan Univ, Guangzhou Red Cross Hosp, Dept Hematol, Guangzhou, Peoples R China
基金
中国国家自然科学基金;
关键词
Bladder cancer (BLCA); Phosphorus metabolism; Prognosis; Nomogram; TRANSMEMBRANE ADAPTER PROTEIN; CELL SUBSETS; T-CELLS; LIME; CD4;
D O I
暂无
中图分类号
R1 [预防医学、卫生学];
学科分类号
1004 ; 120402 ;
摘要
Background: Phosphorus metabolism might be associated with tumor initiation and progression. We aimed to screen out the phosphorus metabolism genes related to bladder cancer and construct a clinical prognosis model. Methods: The dataset used for the analysis was obtained from TCGA database. GO and KEGG enrichment analyses were subsequently applied to differentially expressed genes. Consensus clustering was utilized, and different clusters of the tumor immune microenvironment and other features were compared. The phosphorus metabolism-related genes involved in prognosis were screened out by univariate Cox regression, LASSO regression and multivariate Cox regression analysis, and a nomogram was constructed. The performance of the nomogram was validated using TCGA dataset and the GEO dataset, respectively. Results: Overall, 405 phosphorus metabolism-related differentially expressed genes from TCGA database were identified, which were associated with phosphorylation, cell proliferation, leukocyte activation, and signaling pathways. Two clusters were obtained by consistent clustering. After tumor immune microenvironment analysis, significant differences in immune cell infiltration between cluster 1 and cluster 2 were found. Four phosphorus metabolism-related genes ( LIME1, LRP8, SPDYA, , and MST1R) ) were associated with the prognosis of bladder cancer (BLCA) patients. We built a prognostic model and visualized the model as a nomogram. Calibration curves demonstrated the performance of this nomogram, in agreement with that shown by the ROC curves. Conclusion: We successfully identified four phosphorus metabolism-related genes associated with prognosis, providing potential targets for biomarkers and therapeutics. A nomogram based on these genes was developed. Nevertheless, this study is based on bioinformatics, and experimental validation remains essential.
引用
收藏
页码:1935 / 1950
页数:16
相关论文
共 50 条
  • [21] Comprehensive analysis of fatty acid metabolism-related gene signatures for predicting prognosis in patients with prostate cancer
    Wang, Hongbo
    Liu, Zhendong
    Wang, Yubo
    Han, Dali
    Du, Yuelin
    Zhang, Bin
    He, Yang
    Liu, Junyao
    Xiong, Wei
    Zhang, Xingxing
    Gao, Yanzheng
    Shang, Panfeng
    PEERJ, 2023, 11
  • [22] Identification of metabolism-related genes for predicting peritoneal metastasis in patients with gastric cancer
    Chenyu Tian
    Junjie Zhao
    Dan Liu
    Jie Sun
    Chengbo Ji
    Quan Jiang
    Haojie Li
    Xuefei Wang
    Yihong Sun
    BMC Genomic Data, 23
  • [23] Identification of metabolism-related genes for predicting peritoneal metastasis in patients with gastric cancer
    Tian, Chenyu
    Zhao, Junjie
    Liu, Dan
    Sun, Jie
    Ji, Chengbo
    Jiang, Quan
    Li, Haojie
    Wang, Xuefei
    Sun, Yihong
    BMC GENOMIC DATA, 2022, 23 (01):
  • [24] Comprehensive Analysis of the Expression and Prognosis for Lipid Metabolism-Related Genes in Hepatocellular Carcinoma
    Fan, Wen-Jie
    Ding, Hao
    Chen, Xiang-Xun
    Yang, Lin
    SOUTH ASIAN JOURNAL OF CANCER, 2023, 12 (02) : 126 - 134
  • [25] Characterization and validation of fatty acid metabolism-related genes predicting prognosis, immune infiltration, and drug sensitivity in endometrial cancer
    Li, Haojia
    Zhou, Ting
    Zhang, Qi
    Yao, Yuwei
    Hua, Teng
    Zhang, Jun
    Wang, Hongbo
    BIOTECHNOLOGY AND APPLIED BIOCHEMISTRY, 2024, 71 (04) : 909 - 928
  • [26] A metabolism-related gene signature for predicting the prognosis in thyroid carcinoma
    Du, Qiujing
    Zhou, Ruhao
    Wang, Heng
    Li, Qian
    Yan, Qi
    Dang, Wenjiao
    Guo, Jianjin
    FRONTIERS IN GENETICS, 2023, 13
  • [27] A lactate metabolism-related signature predicting patient prognosis and immune microenvironment in ovarian cancer
    Zhu, Linhua
    Lin, Zhuoqun
    Wang, Kai
    Gu, Jiaxin
    Chen, Xiaojing
    Chen, Ruizhe
    Wang, Lingfang
    Cheng, Xiaodong
    FRONTIERS IN ENDOCRINOLOGY, 2024, 15
  • [28] Identification of novel lactate metabolism-related lncRNAs with prognostic value for bladder cancer
    Wang, Xiushen
    Pan, Jing
    Guan, Qiutong
    Ren, Ninghui
    Wang, Ping
    Wei, Minjie
    Li, Zhenhua
    FRONTIERS IN PHARMACOLOGY, 2023, 14
  • [29] Identification of a novel metabolism-related gene signature associated with the survival of bladder cancer
    Xiaotao Li
    Shi Fu
    Yinglong Huang
    Ting Luan
    Haifeng Wang
    Jiansong Wang
    BMC Cancer, 21
  • [30] Identification of a novel metabolism-related gene signature associated with the survival of bladder cancer
    Li, Xiaotao
    Fu, Shi
    Huang, Yinglong
    Luan, Ting
    Wang, Haifeng
    Wang, Jiansong
    BMC CANCER, 2021, 21 (01)