Usage of Bacterial Whole Genome Sequencing: Outbreaks and Beyond in Pediatric Patients

被引:1
作者
Seth-Smith, Helena [1 ]
Roloff, Tim [1 ]
Benvenga, Vanni [1 ]
Egli, Adrian [1 ]
机构
[1] Univ Zurich, Inst Med Microbiol, Gloriastr 28, CH-8006 Zurich, Switzerland
基金
瑞士国家科学基金会;
关键词
WGS; NGS; pathogen; SCBU; NICU; PICU; HEALTH-CARE; PATHOGENS; FUTURE;
D O I
10.1097/INF.0000000000004588
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
[No abstract available]
引用
收藏
页码:e53 / e55
页数:3
相关论文
共 14 条
[1]   From Theory to Practice: Translating Whole-Genome Sequencing (WGS) into the Clinic [J].
Balloux, Francois ;
Brynildsrud, Ola Bronstad ;
van Dorp, Lucy ;
Shaw, Liam P. ;
Chen, Hongbin ;
Harris, Kathryn A. ;
Wang, Hui ;
Eldholm, Vegard .
TRENDS IN MICROBIOLOGY, 2018, 26 (12) :1035-1048
[2]   Future Challenges in Pediatric and Neonatal Sepsis: Emerging Pathogens and Antimicrobial Resistance [J].
Folgori, Laura ;
Bielicki, Julia .
JOURNAL OF PEDIATRIC INTENSIVE CARE, 2019, 8 (01) :17-24
[3]   Economic and health impact modelling of a whole genome sequencing-led intervention strategy for bacterial healthcare- associated infections for England and for the USA [J].
Fox, John M. ;
Saunders, Nigel J. ;
Jerwood, Susie H. .
MICROBIAL GENOMICS, 2023, 9 (08)
[4]   Outbreaks in the neonatal ICU: a review of the literature [J].
Johnson, Julia ;
Quach, Caroline .
CURRENT OPINION IN INFECTIOUS DISEASES, 2017, 30 (04) :395-403
[5]   Whole-genome sequencing to control antimicrobial resistance [J].
Koeser, Claudio U. ;
Ellington, Matthew J. ;
Peacock, Sharon J. .
TRENDS IN GENETICS, 2014, 30 (09) :401-407
[6]   Clinical perspectives in integrating whole-genome sequencing into the investigation of healthcare and public health outbreaks-hype or help? [J].
Parcell, B. J. ;
Gillespie, S. H. ;
Pettigrew, K. A. ;
Holden, M. T. G. .
JOURNAL OF HOSPITAL INFECTION, 2021, 109 :1-9
[7]   Changing the paradigm for hospital outbreak detection by leading with genomic surveillance of nosocomial pathogens [J].
Peacock, Sharon J. ;
Parkhill, Julian ;
Brown, Nicholas M. .
MICROBIOLOGY-SGM, 2018, 164 (10) :1213-1219
[8]   Sequencing of Enteric Bacteria: Library Preparation Procedure Matters for Accurate Identification and Characterization [J].
Poates, Angela ;
Truong, Jenny ;
Lindsey, Rebecca ;
Griswold, Taylor ;
Williams-Newkirk, Amanda J. ;
Carleton, Heather ;
Trees, Eija .
FOODBORNE PATHOGENS AND DISEASE, 2022, 19 (08) :569-578
[9]   A systematic review of economic evaluations of whole- genome sequencing for the surveillance of bacterial pathogens [J].
Price, Vivien ;
Ngwira, Lucky Gift ;
Lewis, Joseph M. ;
Baker, Kate S. ;
Peacock, Sharon J. ;
Jauneikaite, Elita ;
Feasey, Nicholas .
MICROBIAL GENOMICS, 2023, 9 (02)
[10]   Whole-Genome Sequencing of Bacterial Pathogens: the Future of Nosocomial Outbreak Analysis [J].
Quainoo, Scott ;
Coolen, Jordy P. M. ;
van Hijum, Sacha A. F. T. ;
Huynen, Martijn A. ;
Melchers, Willem J. G. ;
van Schaik, Willem ;
Wertheim, Heiman F. L. .
CLINICAL MICROBIOLOGY REVIEWS, 2017, 30 (04) :1015-1063