Agonist activation to open the Gα subunit of the GPCR-G protein precoupled complex defines functional agonist activation of TAS2R5

被引:0
作者
Yang, Moon Young [1 ]
Mac, Khuong Duy [2 ]
Strzelinski, Hannah R. [3 ]
Hoffman, Samantha A. [3 ]
Kim, Donghwa [3 ]
Kim, Soo - Kyung [1 ]
Su, Judith [4 ]
Liggett, Stephen B. [3 ]
Goddard, William A., III [1 ]
机构
[1] CALTECH, Mat & Proc Simulat Ctr, Pasadena, CA 91125 USA
[2] Univ Arizona, Dept Biomed Engn, Tucson, AZ 85721 USA
[3] Univ South Florida Morsani, Coll Med, Dept Surg, Tampa, FL 33612 USA
[4] Univ Arizona, Wyant Coll Opt Sci, Dept Biomed Engn, Tucson, AZ 85721 USA
关键词
G protein- coupled receptor; bittertaste receptor; airway smooth muscle; FLOWER; metadynamics; BITTER TASTE RECEPTORS; COUPLED RECEPTOR; BETA(2)-ADRENERGIC RECEPTOR; ASSOCIATION; DYNAMICS; OLD;
D O I
10.1073/pnas.2409987121
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
G protein- coupled receptors (GPCRs) regulate multiple cellular responses and represent highly successful therapeutic targets. The mechanisms by which agonists activate the G protein are unclear for many GPCR families, including the bitter taste receptors (TAS2Rs). We ascertained TAS2R5 properties by live cell- based functional assays, direct binding affinity measurements using optical resonators, and atomistic molecular dynamics simulations. We focus on three agonists that exhibit a wide range of signal transduction in cells despite comparable ligand-receptor binding energies derived from direct experiment and computation. Metadynamics simulations revealed that the critical barrier to activation is ligand- induced opening of the G protein between the alpha- helical (AH) and Ras- like domains of G alpha subunit from a precoupled TAS2R5- G protein state to the fully activated state. A moderate agonist opens the AH- Ras cleft from 22 & Aring; to 31 & Aring; with an energy gain of -4.8 kcal mol-1, making GDP water- exposed for signaling. A high- potency agonist had an energy gain of -11.1 kcal mol-1. The low- potency agonist is also exothermic for G alpha opening, but with an energy gain of only -1.4 kcal mol-1. This demonstrates that TAS2R5 agonist- bound functional potencies are derived from energy gains in the transition from a precoupled complex at the level of G alpha opening. Our experimental and computational study provides insights into the activation mechanism of signal transduction that provide a basis for rational design of new drugs.
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  • [61] PLUMED 2: New feathers for an old bird
    Tribello, Gareth A.
    Bonomi, Massimiliano
    Branduardi, Davide
    Camilloni, Carlo
    Bussi, Giovanni
    [J]. COMPUTER PHYSICS COMMUNICATIONS, 2014, 185 (02) : 604 - 613
  • [62] Expression of bitter taste receptors of the T2R family in the gastrointestinal tract and enteroendocrine STC-1 cells
    Wu, SV
    Rozengurt, N
    Yang, M
    Young, SH
    Sinnett-Smith, J
    Rozengurt, E
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (04) : 2392 - 2397
  • [63] Structural basis for strychnine activation of human bitter taste receptor TAS2R46 (Publication with Expression of Concern)
    Xu, Weixiu
    Wu, Lijie
    Liu, Shenhui
    Liu, Xiao
    Cao, Xiaoling
    Zhou, Cui
    Zhang, Jinyi
    Fu, You
    Guo, Yu
    Wu, Yiran
    Tan, Qiwen
    Wang, Ling
    Liu, Junlin
    Jiang, Longquan
    Fan, Zhongbo
    Pei, Yuan
    Yu, Jingyi
    Cheng, Jianjun
    Zhao, Suwen
    Hao, Xiaojiang
    Liu, Zhi-Jie
    Hua, Tian
    [J]. SCIENCE, 2022, 377 (6612) : 1298 - 1303
  • [64] Low Part-Per-Trillion, Humidity Resistant Detection of Nitric Oxide Using Microtoroid Optical Resonators
    Xu, Yinchao
    Stanko, Allison M.
    Cerione, Chloe S.
    Lohrey, Trevor D.
    McLeod, Euan
    Stoltz, Brian M.
    Su, Judith
    [J]. ACS APPLIED MATERIALS & INTERFACES, 2024, 16 (04) : 5120 - 5128
  • [65] G protein-coupled receptors: structure- and function-based drug discovery
    Yang, Dehua
    Zhou, Qingtong
    Labroska, Viktorija
    Qin, Shanshan
    Darbalaei, Sanaz
    Wu, Yiran
    Yuliantie, Elita
    Xie, Linshan
    Tao, Houchao
    Cheng, Jianjun
    Liu, Qing
    Zhao, Suwen
    Shui, Wenqing
    Jiang, Yi
    Wang, Ming-Wei
    [J]. SIGNAL TRANSDUCTION AND TARGETED THERAPY, 2021, 6 (01)
  • [66] G protein coupling and activation of the metabotropic GABAB heterodimer
    Yang, Moon Young
    Kim, Soo-Kyung
    Goddard, William A., III
    [J]. NATURE COMMUNICATIONS, 2022, 13 (01)
  • [67] Yang Moon Young, 2021, QRB Discov, V2, pe3, DOI 10.1017/qrd.2021.1
  • [68] Structures and Agonist Binding Sites of Bitter Taste Receptor TAS2R5 Complexed with Gi Protein and Validated against Experiment
    Yang, Moon Young
    Kim, Soo-Kyung
    Kim, Donghwa
    Liggett, Stephen B.
    Goddard, William A., III
    [J]. JOURNAL OF PHYSICAL CHEMISTRY LETTERS, 2021, 12 (38) : 9293 - 9300
  • [69] Activation of the A2A adenosine G-protein-coupled receptor by conformational selection
    Ye, Libin
    Van Eps, Ned
    Zimmer, Marco
    Ernst, Oliver P.
    Prosser, R. Scott
    [J]. NATURE, 2016, 533 (7602) : 265 - +
  • [70] Association between Polymorphisms in Bitter Taste Receptor Genes and Clinical Features in Korean Asthmatics
    Yoon, Sun-Young
    Shin, Eun-Soon
    Park, So Young
    Kim, Sujeong
    Kwon, Hyouk-Soo
    Cho, You Sook
    Moon, Hee-Bom
    Kim, Tae-Bum
    [J]. RESPIRATION, 2016, 91 (02) : 141 - 150