NMR investigations of glycan conformation, dynamics, and interactions

被引:0
|
作者
Angulo, Jesus [1 ]
Arda, Ana [2 ,3 ]
Bertuzzi, Sara [2 ]
Canales, Angeles [4 ]
Ereno-Orbea, June [2 ,3 ]
Gimeno, Ana [2 ,3 ]
Gomez-Redondo, Marcos [2 ]
Munoz-Garcia, Juan C. [1 ]
Oquist, Paola [4 ]
Monaco, Serena [5 ]
Poveda, Ana [2 ]
Unione, Luca [2 ,3 ]
Jimenez-Barbero, Jesus [2 ,3 ,6 ,7 ]
机构
[1] Univ Seville, Inst Chem Res IIQ, CSIC, 49 Amer Vespucio, Seville 41092, Spain
[2] BRTA, Ctr Cooperat Res Biosci CIC bioGUNE, Derio 48160, Bizkaia, Spain
[3] Basque Fdn Sci, Ikerbasque, Plaza Euskadi 5, Bilbao 48009, Spain
[4] Univ Complutense Madrid, Fac Ciencias Quim, Dept Quim Organ, Avd Complutense S-N, Madrid 28040, Spain
[5] Univ East Anglia, Sch Pharm, Norwich Res Pk, Norwich NR4 7TJ, Norfolk, England
[6] Univ Basque Country, Fac Sci & Technol, Dept Organ & Inorgan Chem, Leioa 48940, Bizkaia, Spain
[7] Ctr Invest Biomed Red Enfermedades Resp, Madrid 28029, Spain
基金
欧洲研究理事会;
关键词
Glycans; Molecular recognition; Glycoproteins; Lectins; Conformation; NUCLEAR-MAGNETIC-RESONANCE; RESIDUAL DIPOLAR COUPLINGS; TRANSFER DIFFERENCE NMR; HIGH-MANNOSE-TYPE; CARBOHYDRATE-RECOGNITION DOMAIN; FIBROBLAST GROWTH-FACTORS; LOW-MOLECULAR-WEIGHT; BLOOD-GROUP ANTIGENS; ASPARAGINE-LINKED OLIGOSACCHARIDES; PROTEIN-STRUCTURE DETERMINATION;
D O I
10.1016/j.pnmrs.2024.10.002
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Glycans are ubiquitous in nature, decorating our cells and serving as the initial points of contact with any visiting entities. These glycan interactions are fundamental to host-pathogen recognition and are related to various diseases, including inflammation and cancer. Therefore, understanding the conformations and dynamics of glycans, as well as the key features that regulate their interactions with proteins, is crucial for designing new therapeutics. Due to the intrinsic flexibility of glycans, NMR is an essential tool for unravelling these properties. In this review, we describe the key NMR parameters that can be extracted from the different experiments, and which allow us to deduce the necessary geometry and molecular motion information, with a special emphasis on assessing the internal motions of the glycosidic linkages. We specifically address the NMR peculiarities of various natural glycans, from histo-blood group antigens to glycosaminoglycans, and also consider the special characteristics of their synthetic analogues (glycomimetics). Finally, we discuss the application of NMR protocols to study glycan-related molecular recognition events, both from the carbohydrate and receptor perspectives, including the use of stable isotopes and paramagnetic NMR methods to overcome the inherent degeneracy of glycan chemical shifts.
引用
收藏
页码:97 / 152
页数:56
相关论文
共 50 条
  • [21] NMR-STUDIES OF DNA CONFORMATION AND DYNAMICS IN SOLUTION
    PATEL, DJ
    KOZLOWSKI, SA
    IKUTA, S
    ITAKURA, K
    BHATT, R
    HARE, DR
    COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY, 1982, 47 : 197 - 206
  • [22] NMR studies on the conformation, stability and dynamics of alamethicin in methanol
    Yoshinori Miura
    European Biophysics Journal, 2020, 49 : 113 - 124
  • [23] NMR studies on the conformation, stability and dynamics of alamethicin in methanol
    Miura, Yoshinori
    EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, 2020, 49 (01): : 113 - 124
  • [24] NMR in natural products: understanding conformation, configuration and receptor interactions
    Carlomagno, Teresa
    NATURAL PRODUCT REPORTS, 2012, 29 (05) : 536 - 554
  • [25] A topical issue: NMR investigations of molecular dynamics
    Palmer, Arthur G., III
    JOURNAL OF BIOMOLECULAR NMR, 2009, 45 (1-2) : 1 - 4
  • [26] A topical issue: NMR investigations of molecular dynamics
    Arthur G. Palmer
    Journal of Biomolecular NMR, 2009, 45 : 1 - 4
  • [27] NMR INSIGHTS INTO THE DYNAMICS AND INTERACTIONS OF CFTR
    Forman-Kay, Julie D.
    PEDIATRIC PULMONOLOGY, 2010, : 144 - 146
  • [28] Disentangling Glycan-Protein Interactions: Nuclear Magnetic Resonance (NMR) to the Rescue
    Bertuzzi, Sara
    Poveda, Ana
    Arda, Ana
    Gimeno, Ana
    Jimenez-Barbero, Jesus
    JOVE-JOURNAL OF VISUALIZED EXPERIMENTS, 2024, (207):
  • [29] Protein-Glycan Quinary Interactions in Crowding Environment Unveiled by NMR Spectroscopy
    Diniz, Ana
    Dias, Jorge S.
    Jimenez-Barbero, Jesus
    Marcelo, Filipa
    Cabrita, Eurico J.
    CHEMISTRY-A EUROPEAN JOURNAL, 2017, 23 (53) : 13213 - 13220
  • [30] NMR INVESTIGATIONS ON INTERACTIONS OF POLYURETHANES WITH CHROMIUM(III) CHLORIDE
    HILLER, W
    GAHDE, J
    GEHRKE, R
    GOETZKY, P
    GRUNDEMANN, E
    STOPPERKA, K
    JOURNAL OF INFORMATION RECORDING MATERIALS, 1990, 18 (01): : 71 - 76