Quelling the Geometry Factor Effect in Quantum Chemical Calculations of 13C NMR Chemical Shifts with the Aid of the pecG-n (n=1, 2) Basis Sets

被引:2
|
作者
Rusakov, Yuriy Yu. [1 ]
Semenov, Valentin A. [1 ]
Rusakova, Irina L. [1 ]
机构
[1] Russian Acad Sci, A E Favorsky Irkutsk Inst Chem, Siberian Branch, Favorsky St 1, Irkutsk 664033, Russia
基金
俄罗斯科学基金会;
关键词
pecG-1; pecG-2; PEC; equilibrium geometry; C-13; NMR; chemical shift; shielding constant; DFT; coupled clusters; natural products; CORRELATED MOLECULAR CALCULATIONS; GAUSSIAN-BASIS SETS; ELECTRON CORRELATION; STRYCHNOS-ICAJA; ORBITAL METHODS; ALKALOIDS; ACID; THERMOCHEMISTRY; SPECTROMETRY; CONVENTIONS;
D O I
10.3390/ijms251910588
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A root factor for the accuracy of all quantum chemical calculations of nuclear magnetic resonance (NMR) chemical shifts is the quality of the molecular equilibrium geometry used. In turn, this quality depends largely on the basis set employed at the geometry optimization stage. This parameter represents the main subject of the present study, which is a continuation of our recent work, where new pecG-n (n = 1, 2) basis sets for the geometry optimization were introduced. A goal of this study was to compare the performance of our geometry-oriented pecG-n (n = 1, 2) basis sets against the other basis sets in massive calculations of C-13 NMR shielding constants/chemical shifts in terms of their efficacy in reducing geometry factor errors. The testing was carried out with both large-sized biologically active natural products and medium-sized compounds with complicated electronic structures. The former were treated using the computation protocol based on the density functional theory (DFT) and considered in the theoretical benchmarking, while the latter were treated using the computational scheme based on the upper-hierarchy coupled cluster (CC) methods and were used in the practical benchmarking involving the comparison with experimental NMR data. Both the theoretical and practical analyses showed that the pecG-1 and pecG-2 basis sets resulted in substantially reduced geometry factor errors in the calculated C-13 NMR chemical shifts/shielding constants compared to their commensurate analogs, with the pecG-2 basis set being the best of all the considered basis sets.<br />
引用
收藏
页数:16
相关论文
共 50 条
  • [41] Deuterium isotope effects on 13C chemical shifts of negatively charged NH•••N systems
    Pietrzak, Mariusz
    Grech, Eugeniusz
    Nowicka-Scheibe, J.
    Hansen, Poul Erik
    MAGNETIC RESONANCE IN CHEMISTRY, 2013, 51 (11) : 683 - 688
  • [42] Structural and solvent effects on the 13C and 15N NMR chemical shifts of indoloquinoline alkaloids:: experimental and DFT study
    Tousek, Jaromir
    Van Miert, Sawne
    Pieters, Luc
    Van Baelen, Gitte
    Hostyn, Steven
    Maes, Bert U. W.
    Lemiere, Guy
    Dommisse, Roger
    Marek, Radek
    MAGNETIC RESONANCE IN CHEMISTRY, 2008, 46 (01) : 42 - 51
  • [43] Heavy Halogen Atom Effect on 13C NMR Chemical Shifts in Monohalo Derivatives of Cyclohexane and Pyran. Experimental and Theoretical Study
    Cunha Neto, Alvaro
    Ducati, Lucas C.
    Rittner, Roberto
    Tormena, Claudio F.
    Contreras, Ruben H.
    Frenking, Gernot
    JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2009, 5 (09) : 2222 - 2228
  • [44] Substituent effects on 15N and 13C NMR chemical shifts of 3-phenylisoxazoles:: a theoretical and spectroscopic study
    Schofield, Mark H.
    Sorel, Marie-Adele
    Manalansan, Ryan J.
    Richardson, David P.
    Markgraf, J. Hodge
    MAGNETIC RESONANCE IN CHEMISTRY, 2006, 44 (09) : 851 - 855
  • [45] The effect of an unsymmetric branched branch on the 13C NMR chemical shifts of main chain carbons in polyethylene
    Jurkiewicz, A
    Eilerts, NW
    Hsieh, ET
    JOURNAL OF POLYMER SCIENCE PART A-POLYMER CHEMISTRY, 2000, 38 (08) : 1210 - 1213
  • [46] 13C and 15N NMR chemical shifts of 1-(2′,4′-dinitrophenyl) and 1-(2′,4′,6′-trinitrophenyl) pyrazoles in the solid state and in solution
    Garcia, M. Angeles
    Claramunt, Rosa M.
    Elguero, Jose
    MAGNETIC RESONANCE IN CHEMISTRY, 2008, 46 (07) : 697 - 700
  • [47] Intramolecular interactions in α-mono-substituted acetic acids through 13C NMR chemical shifts and theoretical calculations
    Freitas, MP
    Campos, MG
    Tormena, CF
    Rittner, R
    CANADIAN JOURNAL OF ANALYTICAL SCIENCES AND SPECTROSCOPY, 2000, 45 (5-6): : 148 - 153
  • [48] 1H and 13C NMR chemical shifts of some thienyl-substituted chromenes
    Moustrou, C
    Rebiere, N
    Frigoli, M
    Pottier, E
    Guglielmetti, R
    Faure, R
    MAGNETIC RESONANCE IN CHEMISTRY, 1998, 36 (07) : 548 - 550
  • [49] Relativistic heavy atom effect on 13C NMR chemical shifts initiated by adjacent multiple chalcogens
    Rusakov, Yu. Yu.
    Rusakova, I. L.
    MAGNETIC RESONANCE IN CHEMISTRY, 2018, 56 (08) : 716 - 726
  • [50] Substituent effects on 1H and 13C NMR chemical shifts in α-monosubstituted ethyl acetates:: principal component analysis and 1H chemical shift calculations
    Tasic, L
    Abraham, RJ
    Rittner, R
    MAGNETIC RESONANCE IN CHEMISTRY, 2002, 40 (07) : 449 - 454