An integrated transcriptomic analysis of brain aging and strategies for healthy aging

被引:0
作者
Liu, Haiying [1 ]
Nie, Xin [2 ]
Wang, Fengwei [1 ]
Chen, Dandan [1 ]
Zeng, Zhuo [1 ]
Shu, Peng [2 ,3 ]
Huang, Junjiu [1 ]
机构
[1] Sun Yat Sen Univ, Sch Life Sci, MOE Key Lab Gene Funct & Regulat, State Key Lab Biocontrol,Guangdong Key Lab Pharmac, Guangzhou, Guangdong, Peoples R China
[2] Shenzhen Hujia Technol Co Ltd, HBN Res Inst & Biol Lab, Shenzhen, Guangdong, Peoples R China
[3] Chinese Acad Sci, Xinjiang Tech Inst Phys & Chem, State Key Lab Basis Xinjiang Indigenous Med Plants, Urumqi, Xinjiang, Peoples R China
来源
FRONTIERS IN AGING NEUROSCIENCE | 2024年 / 16卷
基金
中国国家自然科学基金;
关键词
aging gene; brain aging; neurodegenerative diseases; retard aging; transcriptome; RESTRICTION; PLASTICITY; ACTIVATION; DAMAGE; CELLS; MICE;
D O I
10.3389/fnagi.2024.1450337
中图分类号
R592 [老年病学]; C [社会科学总论];
学科分类号
03 ; 0303 ; 100203 ;
摘要
Background It is been noted that the expression levels of numerous genes undergo changes as individuals age, and aging stands as a primary factor contributing to age-related diseases. Nevertheless, it remains uncertain whether there are common aging genes across organs or tissues, and whether these aging genes play a pivotal role in the development of age-related diseases.Methods In this study, we screened for aging genes using RNAseq data of 32 human tissues from GTEx. RNAseq datasets from GEO were used to study whether aging genes drives age-related diseases, or whether anti-aging solutions could reverse aging gene expression.Results Aging transcriptome alterations showed that brain aging differ significantly from the rest of the body, furthermore, brain tissues were divided into four group according to their aging transcriptome alterations. Numerous genes were downregulated during brain aging, with functions enriched in synaptic function, ubiquitination, mitochondrial translation and autophagy. Transcriptome analysis of age-related diseases and retarding aging solutions showed that downregulated aging genes in the hippocampus further downregulation in Alzheimer's disease but were effectively reversed by high physical activity. Furthermore, the neuron loss observed during aging was reversed by high physical activity.Conclusion The downregulation of many genes is a major contributor to brain aging and neurodegeneration. High levels of physical activity have been shown to effectively reactivate these genes, making it a promising strategy to slow brain aging.
引用
收藏
页数:13
相关论文
共 41 条
  • [1] Differential expression analysis for sequence count data
    Anders, Simon
    Huber, Wolfgang
    [J]. GENOME BIOLOGY, 2010, 11 (10):
  • [2] Cell Death and Neurodegeneration
    Andreone, Benjamin J.
    Larhammar, Martin
    Lewcock, Joseph W.
    [J]. COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY, 2020, 12 (02):
  • [3] Mitochondria, OxPhos, and neurodegeneration: cells are not just running out of gas
    Area-Gomez, Estela
    Guardia-Laguarta, Cristina
    Schon, Eric A.
    Przedborski, Serge
    [J]. JOURNAL OF CLINICAL INVESTIGATION, 2019, 129 (01) : 34 - 45
  • [4] Gene expression changes in the course of normal brain aging are sexually dimorphic
    Berchtold, Nicole C.
    Cribbs, David H.
    Coleman, Paul D.
    Rogers, Joseph
    Head, Elizabeth
    Kim, Ronald
    Beach, Tom
    Miller, Carol
    Troncoso, Juan
    Trojanowski, John Q.
    Zielke, H. Ronald
    Cotman, Carl W.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2008, 105 (40) : 15605 - 15610
  • [5] Hippocampal gene expression patterns linked to late-life physical activity oppose age and AD-related transcriptional decline
    Berchtold, Nicole C.
    Prieto, G. Aleph
    Phelan, Michael
    Gillen, Daniel L.
    Baldi, Pierre
    Bennett, David A.
    Buchman, Aron S.
    Cotman, Carl W.
    [J]. NEUROBIOLOGY OF AGING, 2019, 78 : 142 - 154
  • [6] Deconstruction for Reconstruction: The Role of Proteolysis in Neural Plasticity and Disease
    Bingol, Baris
    Shang, Morgan
    [J]. NEURON, 2011, 69 (01) : 22 - 32
  • [7] Molecular Biomarkers for Weight Control in Obese Individuals Subjected to a Multiphase Dietary Intervention
    Bolton, Jennifer
    Montastier, Emilie
    Carayol, Jerome
    Bonnel, Sophie
    Mir, Lucile
    Marques, Marie-Adeline
    Astrup, Arne
    Saris, Wim
    Iacovoni, Jason
    Villa-Vialaneix, Nathalie
    Valsesia, Armand
    Langin, Dominique
    Viguerie, Nathalie
    [J]. JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM, 2017, 102 (08) : 2751 - 2761
  • [8] Metformin Retards Aging in C. elegans by Altering Microbial Folate and Methionine Metabolism
    Cabreiro, Filipe
    Au, Catherine
    Leung, Kit-Yi
    Vergara-Irigaray, Nuria
    Cocheme, Helena M.
    Noori, Tahereh
    Weinkove, David
    Schuster, Eugene
    Greene, Nicholas D. E.
    Gems, David
    [J]. CELL, 2013, 153 (01) : 228 - 239
  • [9] Temporal dynamics and genetic control of transcription in the human prefrontal cortex
    Colantuoni, Carlo
    Lipska, Barbara K.
    Ye, Tianzhang
    Hyde, Thomas M.
    Tao, Ran
    Leek, Jeffrey T.
    Colantuoni, Elizabeth A.
    Elkahloun, Abdel G.
    Herman, Mary M.
    Weinberger, Daniel R.
    Kleinman, Joel E.
    [J]. NATURE, 2011, 478 (7370) : 519 - U117
  • [10] Cardiovascular fitness, cortical plasticity, and aging
    Colcombe, SJ
    Kramer, AF
    Erickson, KI
    Scalf, P
    McAuley, E
    Cohen, NJ
    Webb, A
    Jerome, GJ
    Marquez, DX
    Elavsky, S
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (09) : 3316 - 3321